Click here to switch to the map view.

The map label for this gene is yqiB [H]

Identifier: 110835358

GI number: 110835358

Start: 2832109

End: 2832567

Strand: Reverse

Name: yqiB [H]

Synonym: ABO_2497

Alternate gene names: 110835358

Gene position: 2832567-2832109 (Counterclockwise)

Preceding gene: 110835359

Following gene: 110835357

Centisome position: 90.78

GC content: 58.17

Gene sequence:

>459_bases
GTGAGTCGCCGCGATCGCTACCAGCTGGATTTCCGTGCGCTGATGACTCAGTGCGAGGAAAACTATGCGCGGCTGTTGCC
CTTGATGAAAGCGTTGGGGGAGCGTGACAGCATGGCTGTGGAAGTGGGCCATGATCACCATTCCCATACTTTGCAGATGA
GCGTGTTGGAGCGTTCCCCCTATACCACTACGGTGCGCCTGGAGGATCAGGAGCTGCTGGCTACGCTGCCGGCGTCCCGC
CTTACCGTGCGCATGTACCATGATGCGCGCCTAGCAGAAGTTACCGAAGCTCGACCTTTTCGGCGGGTAAATGCCCGTTA
TGCCTACCCCAATCGGAACATGCACCAGCGGGACGAGAAAGTGCAGTGGAACCGCTTTTTGGCAGAATGGTTGCGTCACC
TACACGATCATGGCCGCGACAGTGGTCAAGCTTGGCGACAACAAGTCACCGGTGGCTGA

Upstream 100 bases:

>100_bases
CGTTATTGAATGGTGGCCAGGTAGATAACGCGGCCTCGCTGATTGCCCTGCAATGGTTGCTGTTGAATCGTGCCCGGTTG
GATGCGGGTTGGGGAGGTAA

Downstream 100 bases:

>100_bases
TTGCTTGCATGCTTTTAGTCAATAAACAACCTTTCGTGTCACGCTATGTGGAGAATTGGTAACCAATTCCTGCTCTTGGA
CATGTGTCCTAGAAAAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSRRDRYQLDFRALMTQCEENYARLLPLMKALGERDSMAVEVGHDHHSHTLQMSVLERSPYTTTVRLEDQELLATLPASR
LTVRMYHDARLAEVTEARPFRRVNARYAYPNRNMHQRDEKVQWNRFLAEWLRHLHDHGRDSGQAWRQQVTGG

Sequences:

>Translated_152_residues
MSRRDRYQLDFRALMTQCEENYARLLPLMKALGERDSMAVEVGHDHHSHTLQMSVLERSPYTTTVRLEDQELLATLPASR
LTVRMYHDARLAEVTEARPFRRVNARYAYPNRNMHQRDEKVQWNRFLAEWLRHLHDHGRDSGQAWRQQVTGG
>Mature_151_residues
SRRDRYQLDFRALMTQCEENYARLLPLMKALGERDSMAVEVGHDHHSHTLQMSVLERSPYTTTVRLEDQELLATLPASRL
TVRMYHDARLAEVTEARPFRRVNARYAYPNRNMHQRDEKVQWNRFLAEWLRHLHDHGRDSGQAWRQQVTGG

Specific function: Unknown

COG id: COG3151

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789411, Length=139, Percent_Identity=41.0071942446043, Blast_Score=96, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009659 [H]

Pfam domain/function: PF06853 DUF1249 [H]

EC number: NA

Molecular weight: Translated: 18057; Mature: 17925

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRDRYQLDFRALMTQCEENYARLLPLMKALGERDSMAVEVGHDHHSHTLQMSVLERSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEHHHCCCC
YTTTVRLEDQELLATLPASRLTVRMYHDARLAEVTEARPFRRVNARYAYPNRNMHQRDEK
CEEEEEECHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCHHHCCCEEECCCCCCHHHHHH
VQWNRFLAEWLRHLHDHGRDSGQAWRQQVTGG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SRRDRYQLDFRALMTQCEENYARLLPLMKALGERDSMAVEVGHDHHSHTLQMSVLERSP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHEEEHHHCCCC
YTTTVRLEDQELLATLPASRLTVRMYHDARLAEVTEARPFRRVNARYAYPNRNMHQRDEK
CEEEEEECHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCHHHCCCEEECCCCCCHHHHHH
VQWNRFLAEWLRHLHDHGRDSGQAWRQQVTGG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]