| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is icc [H]
Identifier: 110835357
GI number: 110835357
Start: 2831097
End: 2831903
Strand: Reverse
Name: icc [H]
Synonym: ABO_2496
Alternate gene names: 110835357
Gene position: 2831903-2831097 (Counterclockwise)
Preceding gene: 110835358
Following gene: 110835356
Centisome position: 90.76
GC content: 54.52
Gene sequence:
>807_bases TTGACGCAGCAGTTGCAACCCCTTCGCGTTGTGCAGTTGTCAGACTGCCATTTGTTTGCCGATCCGGAAGGTAAGCTGCT GGGCTTAAATACCCAATTCAGCCTGGACAAGGTGCTGGAACTAATCCGCAAGGAGCAACCCAATCCGGATCTGATTCTGG CCACCGGGGACCTGTCTCAGGATGCTTCCTACGAATCCTACCAACGCTTAGATCGCACTTTGTCGGGTTTTGATGTGCCC GTTTACTGGCTGGAAGGGAATCACGATAAGCCCGCTCCCATGTTGCAGGCGCTGGGTGCCCACCGCGAAAAAATGAGCCC CTGTGTGCTTAACGTGGGTAATTGGACCATCGTCATGCTCGACTCCACCATTCCTGGTGAGGTCCCAGGTGAGTTATTCG ACGGGGATCTGTCATTCCTCGATAGTGCTTTGCGTGACGCCACCGGAGACCATCTGATGGTATGTCTGCATCATCACCCG GTACCGATGGAGTGTACTTGGTTGGATGCTCAGGTGGTGGGCAGTGCCGACAAATTTTTCCAAGTCATTGATCGCCATGA GCGAGTGCGTGCCATTATCTGGGGGCATGTGCACCAAGAATATGATAAGCACCGCAACGGCGTGCGGATGATGGCGGTGC CTAGCACCTGTGTGCAGTTCAAACCCAAAAGTGAAGACTTCGCAGTGGATGATGCCAGCCCCGGTTACCGTTGGCTGGAC TTGCATCCGAATGGCCAGATCGACACGGCGGTGAGCCGGGTGGAGGGCATTCCCTTCGAGGTAGATTTCACCATCAAAGG GTATTGA
Upstream 100 bases:
>100_bases TCTTGGTTATAAGTGTCAAGCAGAGCTGTTCCGCGGTGCTGGGGAGTACAGGGAGGAACAGGCAAAAGACATTATATAAA TAGTTAAGGGAGCGGGGATC
Downstream 100 bases:
>100_bases GTTTAACGTTGGAAGTTGAAACGTGGGGTTAGGGCAGACCATTTATCGGTCATCTCTTCGCGTTGCAGGGATAATCTGAA CAACGGGCACTCAAGAGATA
Product: icc protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTQQLQPLRVVQLSDCHLFADPEGKLLGLNTQFSLDKVLELIRKEQPNPDLILATGDLSQDASYESYQRLDRTLSGFDVP VYWLEGNHDKPAPMLQALGAHREKMSPCVLNVGNWTIVMLDSTIPGEVPGELFDGDLSFLDSALRDATGDHLMVCLHHHP VPMECTWLDAQVVGSADKFFQVIDRHERVRAIIWGHVHQEYDKHRNGVRMMAVPSTCVQFKPKSEDFAVDDASPGYRWLD LHPNGQIDTAVSRVEGIPFEVDFTIKGY
Sequences:
>Translated_268_residues MTQQLQPLRVVQLSDCHLFADPEGKLLGLNTQFSLDKVLELIRKEQPNPDLILATGDLSQDASYESYQRLDRTLSGFDVP VYWLEGNHDKPAPMLQALGAHREKMSPCVLNVGNWTIVMLDSTIPGEVPGELFDGDLSFLDSALRDATGDHLMVCLHHHP VPMECTWLDAQVVGSADKFFQVIDRHERVRAIIWGHVHQEYDKHRNGVRMMAVPSTCVQFKPKSEDFAVDDASPGYRWLD LHPNGQIDTAVSRVEGIPFEVDFTIKGY >Mature_267_residues TQQLQPLRVVQLSDCHLFADPEGKLLGLNTQFSLDKVLELIRKEQPNPDLILATGDLSQDASYESYQRLDRTLSGFDVPV YWLEGNHDKPAPMLQALGAHREKMSPCVLNVGNWTIVMLDSTIPGEVPGELFDGDLSFLDSALRDATGDHLMVCLHHHPV PMECTWLDAQVVGSADKFFQVIDRHERVRAIIWGHVHQEYDKHRNGVRMMAVPSTCVQFKPKSEDFAVDDASPGYRWLDL HPNGQIDTAVSRVEGIPFEVDFTIKGY
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=261, Percent_Identity=40.9961685823755, Blast_Score=182, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 30204; Mature: 30072
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQLQPLRVVQLSDCHLFADPEGKLLGLNTQFSLDKVLELIRKEQPNPDLILATGDLSQ CCCCCCCEEEEEEECCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCC DASYESYQRLDRTLSGFDVPVYWLEGNHDKPAPMLQALGAHREKMSPCVLNVGNWTIVML CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEE DSTIPGEVPGELFDGDLSFLDSALRDATGDHLMVCLHHHPVPMECTWLDAQVVGSADKFF CCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHCCHHHHH QVIDRHERVRAIIWGHVHQEYDKHRNGVRMMAVPSTCVQFKPKSEDFAVDDASPGYRWLD HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEEECCCCCCEEECCCCCCEEEEE LHPNGQIDTAVSRVEGIPFEVDFTIKGY ECCCCCHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure TQQLQPLRVVQLSDCHLFADPEGKLLGLNTQFSLDKVLELIRKEQPNPDLILATGDLSQ CCCCCCEEEEEEECCEEEECCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCC DASYESYQRLDRTLSGFDVPVYWLEGNHDKPAPMLQALGAHREKMSPCVLNVGNWTIVML CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEE DSTIPGEVPGELFDGDLSFLDSALRDATGDHLMVCLHHHPVPMECTWLDAQVVGSADKFF CCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECHHHHCCHHHHH QVIDRHERVRAIIWGHVHQEYDKHRNGVRMMAVPSTCVQFKPKSEDFAVDDASPGYRWLD HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHEEECCCCCCEEECCCCCCEEEEE LHPNGQIDTAVSRVEGIPFEVDFTIKGY ECCCCCHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]