| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yqiA [H]
Identifier: 110835356
GI number: 110835356
Start: 2830312
End: 2830902
Strand: Reverse
Name: yqiA [H]
Synonym: ABO_2495
Alternate gene names: 110835356
Gene position: 2830902-2830312 (Counterclockwise)
Preceding gene: 110835357
Following gene: 110835355
Centisome position: 90.73
GC content: 56.18
Gene sequence:
>591_bases ATGCCGGTCCCCGAAACGTCTCTTATTTATATCCACGGTTTCAATAGCTCACCAGCATCCCATAAAGCCGGGTTGTTGCG ATCAGTGTTTGAGCAAGCGGGCTGCCCGGAACGGTTGGTCGTGCCCGCATTGCCGCCTTCGCCAGTGCTAGCCATGGCGG AATTGGATGCAGCCATTGCTGGGGCTGGCCCGGTGGCCCTAGTGGGATCGTCGTTGGGCGGCTTCTACGCCACCTGGCTG GCGGAGCACCATGGTTTGAAGGCTGCAATCGTAAATCCTGCGGTAAGGCCGTGGCGACTACTGGACAAATACACAGGTAT CCAGCATAACTACCATACTGGCGAAGCCTATCAGTTCGATCCGGCTTGGCTGGAGCAGTTGCGCCGCTATGAGGTAGCAG AGCTCACCCAGCCGGAAAATCTATTGTTGCTGACCCAGACGGGTGACGAAACCCTGGACTGGGAAGATGGCTGGGACTAT TACGGCGACTGTCACCGTTATTGTGGCTTGGGTGGCAGTCACGGCTTTGATAACTTTGACGCCTTCATTCCGCTGATGCT GCGGTTTTGTGGGATTGAAATACACGCCTGA
Upstream 100 bases:
>100_bases GAGATACTCTTGAGGATCACGCTCGTGCTTTTTAACTTTGAACTTGCAACTCTTCCCCATCCCGGCACACTTCCGGATAG TGCAGTCATCAGGAAAGATT
Downstream 100 bases:
>100_bases TGCCCGACGCTAGGGGCGGGACATGCGGTAGAGCATGTCTCGCCTCTGGCGCACTGCGTGAGGTGCTGCTGGAAAATCTA TGACCAATAACTATACGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWL AEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDY YGDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA
Sequences:
>Translated_196_residues MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWL AEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDY YGDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA >Mature_195_residues PVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWLA EHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYY GDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=189, Percent_Identity=38.6243386243386, Blast_Score=140, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21580; Mature: 21448
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIA CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHC GAGPVALVGSSLGGFYATWLAEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFD CCCCCEEHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEC PAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYYGDCHRYCGLGGSHGFDNFD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH AFIPLMLRFCGIEIHA HHHHHHHHHHCCEECC >Mature Secondary Structure PVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIA CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHC GAGPVALVGSSLGGFYATWLAEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFD CCCCCEEHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEC PAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYYGDCHRYCGLGGSHGFDNFD HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH AFIPLMLRFCGIEIHA HHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]