Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is yqiA [H]

Identifier: 110835356

GI number: 110835356

Start: 2830312

End: 2830902

Strand: Reverse

Name: yqiA [H]

Synonym: ABO_2495

Alternate gene names: 110835356

Gene position: 2830902-2830312 (Counterclockwise)

Preceding gene: 110835357

Following gene: 110835355

Centisome position: 90.73

GC content: 56.18

Gene sequence:

>591_bases
ATGCCGGTCCCCGAAACGTCTCTTATTTATATCCACGGTTTCAATAGCTCACCAGCATCCCATAAAGCCGGGTTGTTGCG
ATCAGTGTTTGAGCAAGCGGGCTGCCCGGAACGGTTGGTCGTGCCCGCATTGCCGCCTTCGCCAGTGCTAGCCATGGCGG
AATTGGATGCAGCCATTGCTGGGGCTGGCCCGGTGGCCCTAGTGGGATCGTCGTTGGGCGGCTTCTACGCCACCTGGCTG
GCGGAGCACCATGGTTTGAAGGCTGCAATCGTAAATCCTGCGGTAAGGCCGTGGCGACTACTGGACAAATACACAGGTAT
CCAGCATAACTACCATACTGGCGAAGCCTATCAGTTCGATCCGGCTTGGCTGGAGCAGTTGCGCCGCTATGAGGTAGCAG
AGCTCACCCAGCCGGAAAATCTATTGTTGCTGACCCAGACGGGTGACGAAACCCTGGACTGGGAAGATGGCTGGGACTAT
TACGGCGACTGTCACCGTTATTGTGGCTTGGGTGGCAGTCACGGCTTTGATAACTTTGACGCCTTCATTCCGCTGATGCT
GCGGTTTTGTGGGATTGAAATACACGCCTGA

Upstream 100 bases:

>100_bases
GAGATACTCTTGAGGATCACGCTCGTGCTTTTTAACTTTGAACTTGCAACTCTTCCCCATCCCGGCACACTTCCGGATAG
TGCAGTCATCAGGAAAGATT

Downstream 100 bases:

>100_bases
TGCCCGACGCTAGGGGCGGGACATGCGGTAGAGCATGTCTCGCCTCTGGCGCACTGCGTGAGGTGCTGCTGGAAAATCTA
TGACCAATAACTATACGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWL
AEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDY
YGDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA

Sequences:

>Translated_196_residues
MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWL
AEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDY
YGDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA
>Mature_195_residues
PVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIAGAGPVALVGSSLGGFYATWLA
EHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFDPAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYY
GDCHRYCGLGGSHGFDNFDAFIPLMLRFCGIEIHA

Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]

COG id: COG3150

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789409, Length=189, Percent_Identity=38.6243386243386, Blast_Score=140, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008886 [H]

Pfam domain/function: PF05728 UPF0227 [H]

EC number: NA

Molecular weight: Translated: 21580; Mature: 21448

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIA
CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHC
GAGPVALVGSSLGGFYATWLAEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFD
CCCCCEEHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEC
PAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYYGDCHRYCGLGGSHGFDNFD
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH
AFIPLMLRFCGIEIHA
HHHHHHHHHHCCEECC
>Mature Secondary Structure 
PVPETSLIYIHGFNSSPASHKAGLLRSVFEQAGCPERLVVPALPPSPVLAMAELDAAIA
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHC
GAGPVALVGSSLGGFYATWLAEHHGLKAAIVNPAVRPWRLLDKYTGIQHNYHTGEAYQFD
CCCCCEEHHCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEEEC
PAWLEQLRRYEVAELTQPENLLLLTQTGDETLDWEDGWDYYGDCHRYCGLGGSHGFDNFD
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHH
AFIPLMLRFCGIEIHA
HHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]