Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is 110835345
Identifier: 110835345
GI number: 110835345
Start: 2817469
End: 2818503
Strand: Reverse
Name: 110835345
Synonym: ABO_2484
Alternate gene names: NA
Gene position: 2818503-2817469 (Counterclockwise)
Preceding gene: 110835346
Following gene: 110835343
Centisome position: 90.33
GC content: 57.97
Gene sequence:
>1035_bases ATGGATTCATTGTCACAGGCCGTGTTGGGCGCCTCTGTGGGCGGCGCCGTTCTTTCCCGGCCTCTGGGTCGCTGGGCTTT ACTCGGTGGTGCACTGCTGGGGACCTTACCCGATCTGGATGTGTTGATTGACTACGGCGATGCGGTAGTTAATTTCACTG AACATCGCGGCTTCAGTCATTCCCTGTTGGTGTTGCTGCCCGTCTCTTTTTTACTGGCCGTTTGCCTCGCTCGCTGGCAG ACGCGGATTTCCCTATGGCGTTGGTGGTTATTCACCGGCTTGTGCCTGATAACCCATCCGTTGCTGGATACATTCACTAC CTATGGCACGCAACTATTCTGGCCCCTAGGTGACCCGGTGGCCATTAGTAGTGTCTTCATTATCGATCCGTTTTATACCT TGCCGCTGCTGATTGGCGTGCTGTGGACGATAGCAAAACCGTCGTCGTCACGGGTGCTGATCGGCGGCTTGGTGCTGTCC TCGTTGTATCTGGTCTGGAGCCTGGTTGCCCAGTATGCGATGACCCAGCGAGTCATGCCGGCCCTGGCTGAACGCGGACT TTCAGAGGCGCCACGATTAGTGCAGCCAATGCCGTTCTCCACTTTGCTGTGGCGGATCACCGTGCTGGGTGAGCAACAGA GGCTAGAAATTCTCACCGGCCTTCTCGATCAGGATGTGCCGTTGCAGGTGGAATCATTTCCCCGCGATGCGTCACGGTTG GCAGCGATTGAGGCGCTTCCCGCGGGGCAAGCTCTATTGCACTTTACCCGAGGTTTTGTGGCGGTAGAGGTGCATGGTGA TGAGCTGCTGGCCACGGATATTCGTCTTGGGCTACCTGGGCTGCATCCATTCCAGTTTGTTTTGGCTACCCGCCAAGGGG CAGAGTGGCAGCCCTTAATGGCCACCCGCCGGGTACTTCGACCGATGACACATCCGCAGGCCTGGCCGGCACTGTTGTCT CGCACCCTGTCGCGTCCGCCGGGGTTGTGTTTGTCTACCTTGTCAGCGGCGGTGGATGGTCGCGGTTGCCGTTAA
Upstream 100 bases:
>100_bases GGCAGGTTAAGGTGTGATTGAGCGGCGCCTTATGCCGTATTGACGGGCTGTTGGCAGGCAGGGTGGGGACTTTCGCCTTG TCTGCGTTGTTGAGTAATTC
Downstream 100 bases:
>100_bases TCCCACAGTAAAGGCGCTCATGGATGCGGCTGTAACGGTTTCTTTCGTCGCTGGTGATGGTGGCAGAGCCATTCAACCCG GGCATTATCGGGGTTAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Membrane-Bound Metal-Dependent Hydrolase Family Protein; Transmembrane Metal-Dependent Hydrolase; Membrane Bound Hydrolase; Membrane-Bound Metal-Dependent Hydrolase Family
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MDSLSQAVLGASVGGAVLSRPLGRWALLGGALLGTLPDLDVLIDYGDAVVNFTEHRGFSHSLLVLLPVSFLLAVCLARWQ TRISLWRWWLFTGLCLITHPLLDTFTTYGTQLFWPLGDPVAISSVFIIDPFYTLPLLIGVLWTIAKPSSSRVLIGGLVLS SLYLVWSLVAQYAMTQRVMPALAERGLSEAPRLVQPMPFSTLLWRITVLGEQQRLEILTGLLDQDVPLQVESFPRDASRL AAIEALPAGQALLHFTRGFVAVEVHGDELLATDIRLGLPGLHPFQFVLATRQGAEWQPLMATRRVLRPMTHPQAWPALLS RTLSRPPGLCLSTLSAAVDGRGCR
Sequences:
>Translated_344_residues MDSLSQAVLGASVGGAVLSRPLGRWALLGGALLGTLPDLDVLIDYGDAVVNFTEHRGFSHSLLVLLPVSFLLAVCLARWQ TRISLWRWWLFTGLCLITHPLLDTFTTYGTQLFWPLGDPVAISSVFIIDPFYTLPLLIGVLWTIAKPSSSRVLIGGLVLS SLYLVWSLVAQYAMTQRVMPALAERGLSEAPRLVQPMPFSTLLWRITVLGEQQRLEILTGLLDQDVPLQVESFPRDASRL AAIEALPAGQALLHFTRGFVAVEVHGDELLATDIRLGLPGLHPFQFVLATRQGAEWQPLMATRRVLRPMTHPQAWPALLS RTLSRPPGLCLSTLSAAVDGRGCR >Mature_344_residues MDSLSQAVLGASVGGAVLSRPLGRWALLGGALLGTLPDLDVLIDYGDAVVNFTEHRGFSHSLLVLLPVSFLLAVCLARWQ TRISLWRWWLFTGLCLITHPLLDTFTTYGTQLFWPLGDPVAISSVFIIDPFYTLPLLIGVLWTIAKPSSSRVLIGGLVLS SLYLVWSLVAQYAMTQRVMPALAERGLSEAPRLVQPMPFSTLLWRITVLGEQQRLEILTGLLDQDVPLQVESFPRDASRL AAIEALPAGQALLHFTRGFVAVEVHGDELLATDIRLGLPGLHPFQFVLATRQGAEWQPLMATRRVLRPMTHPQAWPALLS RTLSRPPGLCLSTLSAAVDGRGCR
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37739; Mature: 37739
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLSQAVLGASVGGAVLSRPLGRWALLGGALLGTLPDLDVLIDYGDAVVNFTEHRGFSH CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEECCHHHEEHHHHCCCCC SLLVLLPVSFLLAVCLARWQTRISLWRWWLFTGLCLITHPLLDTFTTYGTQLFWPLGDPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH AISSVFIIDPFYTLPLLIGVLWTIAKPSSSRVLIGGLVLSSLYLVWSLVAQYAMTQRVMP HHCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAERGLSEAPRLVQPMPFSTLLWRITVLGEQQRLEILTGLLDQDVPLQVESFPRDASRL HHHHCCHHCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHH AAIEALPAGQALLHFTRGFVAVEVHGDELLATDIRLGLPGLHPFQFVLATRQGAEWQPLM HHHHHCCCCHHHHHHHCCEEEEEECCCEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCHHH ATRRVLRPMTHPQAWPALLSRTLSRPPGLCLSTLSAAVDGRGCR HHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MDSLSQAVLGASVGGAVLSRPLGRWALLGGALLGTLPDLDVLIDYGDAVVNFTEHRGFSH CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEECCHHHEEHHHHCCCCC SLLVLLPVSFLLAVCLARWQTRISLWRWWLFTGLCLITHPLLDTFTTYGTQLFWPLGDPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCH AISSVFIIDPFYTLPLLIGVLWTIAKPSSSRVLIGGLVLSSLYLVWSLVAQYAMTQRVMP HHCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH ALAERGLSEAPRLVQPMPFSTLLWRITVLGEQQRLEILTGLLDQDVPLQVESFPRDASRL HHHHCCHHCCCHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHH AAIEALPAGQALLHFTRGFVAVEVHGDELLATDIRLGLPGLHPFQFVLATRQGAEWQPLM HHHHHCCCCHHHHHHHCCEEEEEECCCEEEEHHHHHCCCCCCHHHHHHHHCCCCCCCHHH ATRRVLRPMTHPQAWPALLSRTLSRPPGLCLSTLSAAVDGRGCR HHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA