Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
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Accession | NC_008260 |
Length | 3,120,143 |
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The map label for this gene is 110835346
Identifier: 110835346
GI number: 110835346
Start: 2818594
End: 2819166
Strand: Reverse
Name: 110835346
Synonym: ABO_2485
Alternate gene names: NA
Gene position: 2819166-2818594 (Counterclockwise)
Preceding gene: 110835349
Following gene: 110835345
Centisome position: 90.35
GC content: 57.59
Gene sequence:
>573_bases ATGAACGCTTTCCGTTTTGGCCTGATGGGGGCCTCTTTGTGTTTGGTTTTGAGTGCGCCGGCCCAGGCGTTTGACCTGAA GTCCATAACTGATTCGGCTAACAAGGCCGTGAGTGACGCCTCTGACAAGGCTTCCTCCAGCGTGAATCAGGCCAATGAAG CTGCCACCGGTGCCATGGATAGCGCCAACAGTCAGCTGGCAGTGACCGGTGAAGCCAAGGCATTAGTGGACTCTCTCTCA ACCGACCTAGGCGTCACGCAGCAACAGGCGGCAGGCGGTGCCGGTGCCTTGCTGGCTATGGCCCAGAGCAACCTGTCAGA TGATCAGTTCAGCGGCATCATGAACAAGGTGCCGGGTTTGGATTCGCTGCTGGGTAGTGGTGGTGGCGTGGCGTCTTCCA TGCTGGGTAATATTTCGTCCCTGCAGGGCGTATCCACAGCCTTTAGCGCCCTAGGTCTGAGCCCGGAAATGATCTCCCAG TTCGCACCGAAAATTCTCGGCTTTCTGGATGGGGAAGGCGTTGGCGCCACTGCCTTGAACAGCCTGAAAGGTGTGTGGGG TGTGGCAGGTTAA
Upstream 100 bases:
>100_bases CCCTGCCACAAAGTGATGGCCCTCGCCTTTTTGCATGGGTAAGGTTTGCCATACTATTTCTCTCTGAATAGAGATGATTG ACGATAATTAAGGAGTAACT
Downstream 100 bases:
>100_bases GGTGTGATTGAGCGGCGCCTTATGCCGTATTGACGGGCTGTTGGCAGGCAGGGTGGGGACTTTCGCCTTGTCTGCGTTGT TGAGTAATTCATGGATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNAFRFGLMGASLCLVLSAPAQAFDLKSITDSANKAVSDASDKASSSVNQANEAATGAMDSANSQLAVTGEAKALVDSLS TDLGVTQQQAAGGAGALLAMAQSNLSDDQFSGIMNKVPGLDSLLGSGGGVASSMLGNISSLQGVSTAFSALGLSPEMISQ FAPKILGFLDGEGVGATALNSLKGVWGVAG
Sequences:
>Translated_190_residues MNAFRFGLMGASLCLVLSAPAQAFDLKSITDSANKAVSDASDKASSSVNQANEAATGAMDSANSQLAVTGEAKALVDSLS TDLGVTQQQAAGGAGALLAMAQSNLSDDQFSGIMNKVPGLDSLLGSGGGVASSMLGNISSLQGVSTAFSALGLSPEMISQ FAPKILGFLDGEGVGATALNSLKGVWGVAG >Mature_190_residues MNAFRFGLMGASLCLVLSAPAQAFDLKSITDSANKAVSDASDKASSSVNQANEAATGAMDSANSQLAVTGEAKALVDSLS TDLGVTQQQAAGGAGALLAMAQSNLSDDQFSGIMNKVPGLDSLLGSGGGVASSMLGNISSLQGVSTAFSALGLSPEMISQ FAPKILGFLDGEGVGATALNSLKGVWGVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18707; Mature: 18707
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAFRFGLMGASLCLVLSAPAQAFDLKSITDSANKAVSDASDKASSSVNQANEAATGAMD CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SANSQLAVTGEAKALVDSLSTDLGVTQQQAAGGAGALLAMAQSNLSDDQFSGIMNKVPGL CCCCEEEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCH DSLLGSGGGVASSMLGNISSLQGVSTAFSALGLSPEMISQFAPKILGFLDGEGVGATALN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH SLKGVWGVAG HHHHHHCCCC >Mature Secondary Structure MNAFRFGLMGASLCLVLSAPAQAFDLKSITDSANKAVSDASDKASSSVNQANEAATGAMD CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SANSQLAVTGEAKALVDSLSTDLGVTQQQAAGGAGALLAMAQSNLSDDQFSGIMNKVPGL CCCCEEEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCH DSLLGSGGGVASSMLGNISSLQGVSTAFSALGLSPEMISQFAPKILGFLDGEGVGATALN HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH SLKGVWGVAG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA