Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835253

Identifier: 110835253

GI number: 110835253

Start: 2714650

End: 2715318

Strand: Direct

Name: 110835253

Synonym: ABO_2392

Alternate gene names: NA

Gene position: 2714650-2715318 (Clockwise)

Preceding gene: 110835250

Following gene: 110835256

Centisome position: 87.0

GC content: 58.59

Gene sequence:

>669_bases
ATGCTAACGGATTTATTGGAAAAAATGGGCTTCGACCTGCCGCAGCAGGAGTGGCAAAAACCCATCATTGGCGTTAGTGC
CTGCCTCACCGGGCAAAAGGTACGCTACGACGGCGACCACAAACACAATGCCATTGTGATCCACCAGCTGGCGCCCTGGT
TACGCTTTCGGGAAACCTGCCCGGAGGTGGCCATTGGCCTGCCCGTACCGCGCCCCCCTATTCAGGTGGTGCAACTGGAG
GGCCGCCTGCGGGTTCGGGGAGTCGATCAGCCCCAACAGGATGTGACCGACGCACTGGAAAACGTGGCGGCCACATTGCA
ACAACCCTTGAGTGGTTTCGTCCTCAAAGCCCGCTCGCCCAGTTGTGGTTACCTGAACACCCCGGTACATAACCCCCAAG
GCCAACAAATCGGCATAGCCTCCGGCGCCTTCGCCAATAAGCTCCACCAACACTTCCCGCGCATTGCGCTGGCCAACGAA
GAAGACATGGAAAAGCCCGCTTGCCTGCAGGCCTTTGTGCTACAGGCATACTGCTACCACCAGTGGCGCCACAACGATCA
GCAAGGCCAATGGCTACATCACATGCAGCAGCAAACCGAGCAGTTGGATGAGCCGCTGCGCAATGACATGCGCCAGTACC
TGGAGCAGCTCGGCCAGGCCATGCATTAA

Upstream 100 bases:

>100_bases
TCGAAGGTGCTGAAGTCCAGCTCACTGGGAACCAGGGTATCGGTATCCAGAAAAACGCCTTGCATAACCTGTCACCGTTG
GGGAAGAAGGGAGGCCTGCC

Downstream 100 bases:

>100_bases
GAGGGTCGCTCAGGCTCTCGTGTTACGTCTTTCAAGCGAATTCGACTTACAAAACCGCACGGTTCATCGGTATGGCGAAT
TAGGCCGAAGGCCGTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLTDLLEKMGFDLPQQEWQKPIIGVSACLTGQKVRYDGDHKHNAIVIHQLAPWLRFRETCPEVAIGLPVPRPPIQVVQLE
GRLRVRGVDQPQQDVTDALENVAATLQQPLSGFVLKARSPSCGYLNTPVHNPQGQQIGIASGAFANKLHQHFPRIALANE
EDMEKPACLQAFVLQAYCYHQWRHNDQQGQWLHHMQQQTEQLDEPLRNDMRQYLEQLGQAMH

Sequences:

>Translated_222_residues
MLTDLLEKMGFDLPQQEWQKPIIGVSACLTGQKVRYDGDHKHNAIVIHQLAPWLRFRETCPEVAIGLPVPRPPIQVVQLE
GRLRVRGVDQPQQDVTDALENVAATLQQPLSGFVLKARSPSCGYLNTPVHNPQGQQIGIASGAFANKLHQHFPRIALANE
EDMEKPACLQAFVLQAYCYHQWRHNDQQGQWLHHMQQQTEQLDEPLRNDMRQYLEQLGQAMH
>Mature_222_residues
MLTDLLEKMGFDLPQQEWQKPIIGVSACLTGQKVRYDGDHKHNAIVIHQLAPWLRFRETCPEVAIGLPVPRPPIQVVQLE
GRLRVRGVDQPQQDVTDALENVAATLQQPLSGFVLKARSPSCGYLNTPVHNPQGQQIGIASGAFANKLHQHFPRIALANE
EDMEKPACLQAFVLQAYCYHQWRHNDQQGQWLHHMQQQTEQLDEPLRNDMRQYLEQLGQAMH

Specific function: Unknown

COG id: COG1683

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25315; Mature: 25315

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTDLLEKMGFDLPQQEWQKPIIGVSACLTGQKVRYDGDHKHNAIVIHQLAPWLRFRETC
CHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHHHHHHC
PEVAIGLPVPRPPIQVVQLEGRLRVRGVDQPQQDVTDALENVAATLQQPLSGFVLKARSP
HHHEECCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
SCGYLNTPVHNPQGQQIGIASGAFANKLHQHFPRIALANEEDMEKPACLQAFVLQAYCYH
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCEEECCHHHCCCHHHHHHHHHHHHHHH
QWRHNDQQGQWLHHMQQQTEQLDEPLRNDMRQYLEQLGQAMH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTDLLEKMGFDLPQQEWQKPIIGVSACLTGQKVRYDGDHKHNAIVIHQLAPWLRFRETC
CHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCEEEECCCCCCCEEEHHHHHHHHHHHHHC
PEVAIGLPVPRPPIQVVQLEGRLRVRGVDQPQQDVTDALENVAATLQQPLSGFVLKARSP
HHHEECCCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
SCGYLNTPVHNPQGQQIGIASGAFANKLHQHFPRIALANEEDMEKPACLQAFVLQAYCYH
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHCCCEEECCHHHCCCHHHHHHHHHHHHHHH
QWRHNDQQGQWLHHMQQQTEQLDEPLRNDMRQYLEQLGQAMH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA