| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835256
Identifier: 110835256
GI number: 110835256
Start: 2718791
End: 2719111
Strand: Direct
Name: 110835256
Synonym: ABO_2396
Alternate gene names: NA
Gene position: 2718791-2719111 (Clockwise)
Preceding gene: 110835253
Following gene: 110835260
Centisome position: 87.14
GC content: 57.63
Gene sequence:
>321_bases TTGCCATTAGATCTCCACGTACAGCTGGCCGCCTTCTTCCGTTACCGGCCAAGTTTCCAGGGCTTTCTCGCCCCGCACCA CATTCAGTATTTGCACCCCCGGCGGGAAGTTCGCCCACTCGGTGACGGCACCGGTGCGGATATCAAACTTGGCCCGGTGC AGCGGGCACTGCACACACTGATCTTTAAGAATTTTGCCTTTGCCCAGCGACACAAACATATGGCTACAACGGGCCTGAGT GGCATAGAAGCCATCACTCAGGTGGTACACCACCAGCTTGGTGTCCCCCGCCTTCATGGCGCGGCTTTGTCCTTCCGGTA A
Upstream 100 bases:
>100_bases ATTTGAAACTTGGTGAAGGGAATGCCAATACTGCTGTCAGTGAAGCGGCTGAATTTTTCCAACCGCTCCAGCGCGGCTTG CTGCTGCGCCTTGCTCCGAT
Downstream 100 bases:
>100_bases ATCTTGGCTGGCACAGAGTTCATAACGCATGGTGGTCTCCTTGCTGGCTGAGAATCAGTAATGAGTTGAACGTTCAACTC ATTCATTCCAAATAGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MPLDLHVQLAAFFRYRPSFQGFLAPHHIQYLHPRREVRPLGDGTGADIKLGPVQRALHTLIFKNFAFAQRHKHMATTGLS GIEAITQVVHHQLGVPRLHGAALSFR
Sequences:
>Translated_106_residues MPLDLHVQLAAFFRYRPSFQGFLAPHHIQYLHPRREVRPLGDGTGADIKLGPVQRALHTLIFKNFAFAQRHKHMATTGLS GIEAITQVVHHQLGVPRLHGAALSFR >Mature_105_residues PLDLHVQLAAFFRYRPSFQGFLAPHHIQYLHPRREVRPLGDGTGADIKLGPVQRALHTLIFKNFAFAQRHKHMATTGLSG IEAITQVVHHQLGVPRLHGAALSFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11934; Mature: 11803
Theoretical pI: Translated: 11.75; Mature: 11.75
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLDLHVQLAAFFRYRPSFQGFLAPHHIQYLHPRREVRPLGDGTGADIKLGPVQRALHTL CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHH IFKNFAFAQRHKHMATTGLSGIEAITQVVHHQLGVPRLHGAALSFR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PLDLHVQLAAFFRYRPSFQGFLAPHHIQYLHPRREVRPLGDGTGADIKLGPVQRALHTL CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHH IFKNFAFAQRHKHMATTGLSGIEAITQVVHHQLGVPRLHGAALSFR HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA