| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835172
Identifier: 110835172
GI number: 110835172
Start: 2636366
End: 2636824
Strand: Reverse
Name: 110835172
Synonym: ABO_2311
Alternate gene names: NA
Gene position: 2636824-2636366 (Counterclockwise)
Preceding gene: 110835180
Following gene: 110835171
Centisome position: 84.51
GC content: 46.84
Gene sequence:
>459_bases ATGTCTCCTTTAGATTTCTACATCGGCTTGGCAATTACCAACATCGTTGTTCTTGGTGGTTGGGCTTTCTCAATTGTCCA GAACAAAGTAGCACTTCGTCGTGAGCGACGCGTATCTCAATTGGCTGCTGCCTACGATACCTTTGTCCGTGTAGGAATAG ATGGTGGTCGGCCTGTTCGCATAAATGCGGCTGGGGAGCTCGACGATTACACCCGGGAATTTGAACACGCTGTTGCAACG GTGCATCTCTATGGAACAGAGGAGGAGGCGGAGCTTACAAATATTTTTGTTAGGCAACTTACCGGAAAAAATCATTACAG TGCGGATGACCTCGTCAATGCTCTGCGGAACGATATAAGAAAAGAGATGGGAATGGCTGCGCTCAAGCATGCACCAACAT ATTTAAAGCAAACTATTACTGATAATCGGGTTCGCCCCACGAATGAAGCCAAAACCTAA
Upstream 100 bases:
>100_bases GTTATGGGTTTATCGGAATTATATGCGGTGGCCGGCTAAGAAATATGTCGAAAAAAGATATGTCGAAACGTTCGACTGAA TACGCTGTTAGGTTTCGAAA
Downstream 100 bases:
>100_bases CAAATTGTTGTAGTTCGTTCCGGCCTGCGGCCTCCACCGGACGCCCTTGAGGGGGCGCCGCTAAACAAAAGCGTTATGTT TCCAAGAGGTAGTGTGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSPLDFYIGLAITNIVVLGGWAFSIVQNKVALRRERRVSQLAAAYDTFVRVGIDGGRPVRINAAGELDDYTREFEHAVAT VHLYGTEEEAELTNIFVRQLTGKNHYSADDLVNALRNDIRKEMGMAALKHAPTYLKQTITDNRVRPTNEAKT
Sequences:
>Translated_152_residues MSPLDFYIGLAITNIVVLGGWAFSIVQNKVALRRERRVSQLAAAYDTFVRVGIDGGRPVRINAAGELDDYTREFEHAVAT VHLYGTEEEAELTNIFVRQLTGKNHYSADDLVNALRNDIRKEMGMAALKHAPTYLKQTITDNRVRPTNEAKT >Mature_151_residues SPLDFYIGLAITNIVVLGGWAFSIVQNKVALRRERRVSQLAAAYDTFVRVGIDGGRPVRINAAGELDDYTREFEHAVATV HLYGTEEEAELTNIFVRQLTGKNHYSADDLVNALRNDIRKEMGMAALKHAPTYLKQTITDNRVRPTNEAKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17035; Mature: 16903
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLDFYIGLAITNIVVLGGWAFSIVQNKVALRRERRVSQLAAAYDTFVRVGIDGGRPVR CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE INAAGELDDYTREFEHAVATVHLYGTEEEAELTNIFVRQLTGKNHYSADDLVNALRNDIR EECCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KEMGMAALKHAPTYLKQTITDNRVRPTNEAKT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SPLDFYIGLAITNIVVLGGWAFSIVQNKVALRRERRVSQLAAAYDTFVRVGIDGGRPVR CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE INAAGELDDYTREFEHAVATVHLYGTEEEAELTNIFVRQLTGKNHYSADDLVNALRNDIR EECCCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KEMGMAALKHAPTYLKQTITDNRVRPTNEAKT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA