| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835171
Identifier: 110835171
GI number: 110835171
Start: 2635976
End: 2636290
Strand: Reverse
Name: 110835171
Synonym: ABO_2310
Alternate gene names: NA
Gene position: 2636290-2635976 (Counterclockwise)
Preceding gene: 110835172
Following gene: 110835170
Centisome position: 84.49
GC content: 32.7
Gene sequence:
>315_bases ATGTTTCCAAGAGGTAGTGTGTCAATGGAACTAAGAATAGATAGATTTGTATGGGTGCTAGCATGCAGTTTATGCACTGT TGCTACAGCCTTTCTATTTGTTCCAGATTTGGCCAATATCTATTTTTCATACGGATGCTACTTTGTTTATTTGGCTTTTT TTGTCGGCTTAATGGCAATTTCTTTAACTTGGTATCGTTCATATAAGTTAAAAGGTTGGCGTAATCACGTAATGGCTTTA ATAAAAACGATTGTTCTTATAGGCATTTTTACTTCAACATTTATAATATTGATTGTTACACATAGTGGTATTTAA
Upstream 100 bases:
>100_bases CCCCACGAATGAAGCCAAAACCTAACAAATTGTTGTAGTTCGTTCCGGCCTGCGGCCTCCACCGGACGCCCTTGAGGGGG CGCCGCTAAACAAAAGCGTT
Downstream 100 bases:
>100_bases AATTAAAAACATAACAAACAGCTCCACCGGACTCCGTAATGTTTGCACCTTTCCTGCAAAAACACGCAGCAAAGTCGCCA ACATTACTACGCGCGGTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MFPRGSVSMELRIDRFVWVLACSLCTVATAFLFVPDLANIYFSYGCYFVYLAFFVGLMAISLTWYRSYKLKGWRNHVMAL IKTIVLIGIFTSTFIILIVTHSGI
Sequences:
>Translated_104_residues MFPRGSVSMELRIDRFVWVLACSLCTVATAFLFVPDLANIYFSYGCYFVYLAFFVGLMAISLTWYRSYKLKGWRNHVMAL IKTIVLIGIFTSTFIILIVTHSGI >Mature_104_residues MFPRGSVSMELRIDRFVWVLACSLCTVATAFLFVPDLANIYFSYGCYFVYLAFFVGLMAISLTWYRSYKLKGWRNHVMAL IKTIVLIGIFTSTFIILIVTHSGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11922; Mature: 11922
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPRGSVSMELRIDRFVWVLACSLCTVATAFLFVPDLANIYFSYGCYFVYLAFFVGLMAI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLTWYRSYKLKGWRNHVMALIKTIVLIGIFTSTFIILIVTHSGI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure MFPRGSVSMELRIDRFVWVLACSLCTVATAFLFVPDLANIYFSYGCYFVYLAFFVGLMAI CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLTWYRSYKLKGWRNHVMALIKTIVLIGIFTSTFIILIVTHSGI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA