Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835170

Identifier: 110835170

GI number: 110835170

Start: 2635371

End: 2635937

Strand: Reverse

Name: 110835170

Synonym: ABO_2309

Alternate gene names: NA

Gene position: 2635937-2635371 (Counterclockwise)

Preceding gene: 110835171

Following gene: 110835169

Centisome position: 84.48

GC content: 43.74

Gene sequence:

>567_bases
ATGTTTGCACCTTTCCTGCAAAAACACGCAGCAAAGTCGCCAACATTACTACGCGCGGTGAGCTGGGCGTTAAGAGGTAT
CCGTTTGTCTTATCCAGACGTGAGCTTTCTCAAAGATCCTTTAAGCCATATAACTAGGTTGGAGAGAAGAAACCTCATTC
TAGCTTCTTCAGCAGGTTTTCTTATAACGAAGGCGAACCTCGTACCAAGGGAGATTTCTGCGCTAGGAATTAGCTTGTCA
GCACCTGAGCAGGGGGTTTTTCTCTTCTTTGTCAGTGGAATGATAATCTACTTTTGGGTGGCCTTCGTGGCTTTTGGATT
GTCTGATTTTTTTATTTGGCGCAAGGCTTATCAAGATTATTTGGAAGAACGTGAGGCTAGCATAGAGTCAGAATCCGAAG
AATCAAATATGGCTTTTGAAATGTCGGGTCTGCCAAGCCTTGCCTGGCTATACAAAAAAGCAGGGTTGTTGTCATTCTTT
AGGGCTGTTGTGGAATATTTATTTCCGCTGATATTTGGGTTTTATGTGGCAGTATTGGGGTTGCTGGGTTGGTTTTGCTC
CTCTTAA

Upstream 100 bases:

>100_bases
TTCTTATAGGCATTTTTACTTCAACATTTATAATATTGATTGTTACACATAGTGGTATTTAAAATTAAAAACATAACAAA
CAGCTCCACCGGACTCCGTA

Downstream 100 bases:

>100_bases
CAAGCGGCGGCAGGCGGATCAAATTTGCGCTCGTTCCTCGCTGCAATTTGCCCGCTGCGCCGGGCGTTAGCAGTCAAAGG
GAAGATCGAGTGATACTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MFAPFLQKHAAKSPTLLRAVSWALRGIRLSYPDVSFLKDPLSHITRLERRNLILASSAGFLITKANLVPREISALGISLS
APEQGVFLFFVSGMIIYFWVAFVAFGLSDFFIWRKAYQDYLEEREASIESESEESNMAFEMSGLPSLAWLYKKAGLLSFF
RAVVEYLFPLIFGFYVAVLGLLGWFCSS

Sequences:

>Translated_188_residues
MFAPFLQKHAAKSPTLLRAVSWALRGIRLSYPDVSFLKDPLSHITRLERRNLILASSAGFLITKANLVPREISALGISLS
APEQGVFLFFVSGMIIYFWVAFVAFGLSDFFIWRKAYQDYLEEREASIESESEESNMAFEMSGLPSLAWLYKKAGLLSFF
RAVVEYLFPLIFGFYVAVLGLLGWFCSS
>Mature_188_residues
MFAPFLQKHAAKSPTLLRAVSWALRGIRLSYPDVSFLKDPLSHITRLERRNLILASSAGFLITKANLVPREISALGISLS
APEQGVFLFFVSGMIIYFWVAFVAFGLSDFFIWRKAYQDYLEEREASIESESEESNMAFEMSGLPSLAWLYKKAGLLSFF
RAVVEYLFPLIFGFYVAVLGLLGWFCSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21263; Mature: 21263

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAPFLQKHAAKSPTLLRAVSWALRGIRLSYPDVSFLKDPLSHITRLERRNLILASSAGF
CCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCE
LITKANLVPREISALGISLSAPEQGVFLFFVSGMIIYFWVAFVAFGLSDFFIWRKAYQDY
EEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEREASIESESEESNMAFEMSGLPSLAWLYKKAGLLSFFRAVVEYLFPLIFGFYVAVLG
HHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGWFCSS
HHHHHHCC
>Mature Secondary Structure
MFAPFLQKHAAKSPTLLRAVSWALRGIRLSYPDVSFLKDPLSHITRLERRNLILASSAGF
CCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCE
LITKANLVPREISALGISLSAPEQGVFLFFVSGMIIYFWVAFVAFGLSDFFIWRKAYQDY
EEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEREASIESESEESNMAFEMSGLPSLAWLYKKAGLLSFFRAVVEYLFPLIFGFYVAVLG
HHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGWFCSS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA