Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is asmA [C]

Identifier: 110835145

GI number: 110835145

Start: 2603277

End: 2605484

Strand: Direct

Name: asmA [C]

Synonym: ABO_2284

Alternate gene names: 110835145

Gene position: 2603277-2605484 (Clockwise)

Preceding gene: 110835143

Following gene: 110835146

Centisome position: 83.43

GC content: 56.48

Gene sequence:

>2208_bases
ATGGGACGCCTGTTAAAAATTTTGCTGATCACTTTGTTTGCCATCATTGTGCTATTAGCCATTGCCGTTTTTGTGATCAC
GCAGGTGATTGATCCCAACGAATTCAAGCCGGAAATCGAAAAACAGGCGCAAGAGCAGGCCAACCTGACACTGGATATTC
AGGGCGACCTGGCCTGGCAGTTCTGGCCATCGCTGGGTGTCAGCCTTGGGCGCACCGAAGCACGCATTGCCGATGACGAA
GAGTTGTTCGCGGCCCTCGACGAAGCCAGCGTCAGCGTTGCCGTATTACCGCTGCTGTATGGCCAGGTGGAAATGGACGG
CATCACCCTTGCGGGTCTGGATGTGAACCTGGTGGACGGCCCGGACGGCGCTAACTGGGAACAGATCGGCCCGCAGACGC
CGGCAGAAGACACCGCCACCGAAGAAGAGCCCGCAGCCGAAGAAGACAGCACCAGCCTGGACATTCCGCTGACCATTCCC
AAAGTCGTCGTCAGCGACGGCAAGGTCCGCTATCGCAACACCGCCGACGGCACCGACATCATCGTCGAGCACTTTAACCT
GAACGCCCAGGACGTGAACCTGGATGAGCCCTTCCCGCTGCAGATGTCCCTGCGCTATCAGGACCAGAGCGACATGCGCG
TGGACATGAATCTGGACACGGTACTGGCCGCCGATATCGACAATAACCATTTCGTCCTCAACCCGATGACCCTGGATGCC
AATATCGCCGGCGCCACCACCATGCCGGTGGATGTGCATCTGGAACAGAATCTGGACGTGAACCTGAACGAGGACACCGT
CTCCATCAAGGACCTGCTACTGCAAGCCGCCGGCACCGAAACCAAAGGCAACGTGGACATCACTGCCCTCACCGGCGACA
TGCAGCTCAGCGGCAAGCTGGCCACCGCGCCTTTCGATGCCAACAAAGTACTGGAAGCCATTGGCGAGGCCCCCATCGAA
ACCACCGACAGCCAAGCACTGAGCAACATTGCCCTAGAGGCCACCTTGGGCGGCGAGCCCGGCAGCGTCATGGCCAGCCC
GCTCACCGTGACCCTGGATGACAGCACCCTCCGTGGGAGCGCTGGTCTAGCCAGCCTGGAAAGCGGAAAAATCGTCTTTG
ATCTGACGCTCGATAAAATCACTCTAGATGGCTACATGCCTCCCGCCAGCGGCGAAACTGAAACCGCGGCACCTGGCGGC
GGCAAAACCGGCGGCACCAATAGCCTCAGCGACGCAGAATTGATCCCCGTGGACACGCTGCGCCCATTACGGGTAGACGG
CAAACTGGCCATCGGCAGTCTCAACTATGACGGCATCAGCGCCAGCGATATGAAATTTGCGGTTACCGCCAACAACGGCG
TCCTCAAATTGACCCAAGCCACCGGCAACACCCTGGGCGGCAGTTTCAGCGCCAACGGCACGCTAAATGTCGCCGGCAGC
ACCCCAAAAATTTCGGCCACTAACAAAATCAGCAGCGTACAAATTCAGCCCATCGCCCAGATGGCACTCGACGACGATCT
CGCCAAGGGTATTTTTTCCATGTCCGGCAGCTACAGCGCTAATGGCAACAGTGAAAAAGCACTGATGAACTCCGCTAAAG
GCAACATCGATCTAAGCCTGGCTGACGCCACTGTGCGCGGCCTGAACCTGTACGACACCCTGGTAGGTGGCGTGAACGAC
ATGTTGGGTCAATTTCAGGGATTAGCAGCCGCCCTAATTCCCAACCAAGAATCGGGCAAGCTGCCTTCCCCTCTATCCGA
AGACACCAAAATTCTTGACCTTAAAACCAAGGCTCGGCTGGACAAGAACGTAGCCTATCTCGACAGTCTTAATGCCACCC
TCAGCAAGGGTGAATTAAGCGGTAGCGGCTGGATGAACATACTCAACCAAGACTTCGACCTGAAAATTGGCATGCAGTCA
CCAGAGTTGGGCACATCCAAGTATTTGCAAGGCACCACCTGGCCACTACGTTGTGAAGGCAACCTAGGCGGCAGCCCGGC
CAAATGGTGCGGCCCTGACAAGGATGGCTTCAAGGACATTGGTAAACAGGTCGCCGCTAACGCCACCAAGGACAAGCTAA
AAGACAAATTCGGCATTGAAGGTGAGGGTGACACCACCGAAGAAATCCTCAAGGATGCCGCACAAAAGAAAGCCAAGGAC
GAAATCAACAAACAGCTACAGGACGGCCTAAAGAAACTGTTTAATTAA

Upstream 100 bases:

>100_bases
CCTAACGTCACAATAACAATCATGAATAATGCTACGGTATGGTCAGTGAATCCCCACTGCTATAATCACGGTCCAACGAC
CAACGCGCAAGGAGTGCTAC

Downstream 100 bases:

>100_bases
AAACCGCGGTGTATTTCACACGCACGCGGCCGCTAAACCGAACCGCAATCGTAGGGCGAAAGCAAACCAACGTCAGCTTT
CGCCCTACCCACCCGGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: AsmA Protein; AsmA Family; Outer Membrane Protein Assembly Protein AsmA; AsmA Family Superfamily; Protein Involved In Outer Membrane Biogenesis AsmA Family; Assembly Protein

Number of amino acids: Translated: 735; Mature: 734

Protein sequence:

>735_residues
MGRLLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWPSLGVSLGRTEARIADDE
ELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDGPDGANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIP
KVVVSDGKVRYRNTADGTDIIVEHFNLNAQDVNLDEPFPLQMSLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDA
NIAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDITALTGDMQLSGKLATAPFDANKVLEAIGEAPIE
TTDSQALSNIALEATLGGEPGSVMASPLTVTLDDSTLRGSAGLASLESGKIVFDLTLDKITLDGYMPPASGETETAAPGG
GKTGGTNSLSDAELIPVDTLRPLRVDGKLAIGSLNYDGISASDMKFAVTANNGVLKLTQATGNTLGGSFSANGTLNVAGS
TPKISATNKISSVQIQPIAQMALDDDLAKGIFSMSGSYSANGNSEKALMNSAKGNIDLSLADATVRGLNLYDTLVGGVND
MLGQFQGLAAALIPNQESGKLPSPLSEDTKILDLKTKARLDKNVAYLDSLNATLSKGELSGSGWMNILNQDFDLKIGMQS
PELGTSKYLQGTTWPLRCEGNLGGSPAKWCGPDKDGFKDIGKQVAANATKDKLKDKFGIEGEGDTTEEILKDAAQKKAKD
EINKQLQDGLKKLFN

Sequences:

>Translated_735_residues
MGRLLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWPSLGVSLGRTEARIADDE
ELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDGPDGANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIP
KVVVSDGKVRYRNTADGTDIIVEHFNLNAQDVNLDEPFPLQMSLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDA
NIAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDITALTGDMQLSGKLATAPFDANKVLEAIGEAPIE
TTDSQALSNIALEATLGGEPGSVMASPLTVTLDDSTLRGSAGLASLESGKIVFDLTLDKITLDGYMPPASGETETAAPGG
GKTGGTNSLSDAELIPVDTLRPLRVDGKLAIGSLNYDGISASDMKFAVTANNGVLKLTQATGNTLGGSFSANGTLNVAGS
TPKISATNKISSVQIQPIAQMALDDDLAKGIFSMSGSYSANGNSEKALMNSAKGNIDLSLADATVRGLNLYDTLVGGVND
MLGQFQGLAAALIPNQESGKLPSPLSEDTKILDLKTKARLDKNVAYLDSLNATLSKGELSGSGWMNILNQDFDLKIGMQS
PELGTSKYLQGTTWPLRCEGNLGGSPAKWCGPDKDGFKDIGKQVAANATKDKLKDKFGIEGEGDTTEEILKDAAQKKAKD
EINKQLQDGLKKLFN
>Mature_734_residues
GRLLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQFWPSLGVSLGRTEARIADDEE
LFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDGPDGANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIPK
VVVSDGKVRYRNTADGTDIIVEHFNLNAQDVNLDEPFPLQMSLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDAN
IAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDITALTGDMQLSGKLATAPFDANKVLEAIGEAPIET
TDSQALSNIALEATLGGEPGSVMASPLTVTLDDSTLRGSAGLASLESGKIVFDLTLDKITLDGYMPPASGETETAAPGGG
KTGGTNSLSDAELIPVDTLRPLRVDGKLAIGSLNYDGISASDMKFAVTANNGVLKLTQATGNTLGGSFSANGTLNVAGST
PKISATNKISSVQIQPIAQMALDDDLAKGIFSMSGSYSANGNSEKALMNSAKGNIDLSLADATVRGLNLYDTLVGGVNDM
LGQFQGLAAALIPNQESGKLPSPLSEDTKILDLKTKARLDKNVAYLDSLNATLSKGELSGSGWMNILNQDFDLKIGMQSP
ELGTSKYLQGTTWPLRCEGNLGGSPAKWCGPDKDGFKDIGKQVAANATKDKLKDKFGIEGEGDTTEEILKDAAQKKAKDE
INKQLQDGLKKLFN

Specific function: Involved In The Inhibition Of Assembly Of Mutant Ompf Proteins. In General, Could Be Involved In The Assembly Of Outer Membrane Proteins. [C]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=327, Percent_Identity=22.9357798165138, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77840; Mature: 77709

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCEEEE
FWPSLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDG
ECHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCEEEECCEEEECEEEEEECC
PDGANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIPKVVVSDGKVRYRNTADGTDI
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCEE
IVEHFNLNAQDVNLDEPFPLQMSLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDA
EEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEEECCCCEEEEEEEEECC
NIAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDITALTGDMQLSGKL
CCCCCEECEEEEEEECCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCEE
ATAPFDANKVLEAIGEAPIETTDSQALSNIALEATLGGEPGSVMASPLTVTLDDSTLRGS
EECCCCHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCCCEEECCEEEEECCCCCCCC
AGLASLESGKIVFDLTLDKITLDGYMPPASGETETAAPGGGKTGGTNSLSDAELIPVDTL
CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
RPLRVDGKLAIGSLNYDGISASDMKFAVTANNGVLKLTQATGNTLGGSFSANGTLNVAGS
CCEEECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEECCCEEEECCC
TPKISATNKISSVQIQPIAQMALDDDLAKGIFSMSGSYSANGNSEKALMNSAKGNIDLSL
CCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEE
ADATVRGLNLYDTLVGGVNDMLGQFQGLAAALIPNQESGKLPSPLSEDTKILDLKTKARL
ECCEECCCCHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHH
DKNVAYLDSLNATLSKGELSGSGWMNILNQDFDLKIGMQSPELGTSKYLQGTTWPLRCEG
CCCCHHHHHCCCHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCEEEECC
NLGGSPAKWCGPDKDGFKDIGKQVAANATKDKLKDKFGIEGEGDTTEEILKDAAQKKAKD
CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EINKQLQDGLKKLFN
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRLLKILLITLFAIIVLLAIAVFVITQVIDPNEFKPEIEKQAQEQANLTLDIQGDLAWQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCEEEE
FWPSLGVSLGRTEARIADDEELFAALDEASVSVAVLPLLYGQVEMDGITLAGLDVNLVDG
ECHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCEEEECCEEEECEEEEEECC
PDGANWEQIGPQTPAEDTATEEEPAAEEDSTSLDIPLTIPKVVVSDGKVRYRNTADGTDI
CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCCCEE
IVEHFNLNAQDVNLDEPFPLQMSLRYQDQSDMRVDMNLDTVLAADIDNNHFVLNPMTLDA
EEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEECCCCEEEEEECCCCEEEEEEEEECC
NIAGATTMPVDVHLEQNLDVNLNEDTVSIKDLLLQAAGTETKGNVDITALTGDMQLSGKL
CCCCCEECEEEEEEECCCCEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCEEECCEE
ATAPFDANKVLEAIGEAPIETTDSQALSNIALEATLGGEPGSVMASPLTVTLDDSTLRGS
EECCCCHHHHHHHHCCCCCCCCCHHHHHHEEEEEEECCCCCCEEECCEEEEECCCCCCCC
AGLASLESGKIVFDLTLDKITLDGYMPPASGETETAAPGGGKTGGTNSLSDAELIPVDTL
CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
RPLRVDGKLAIGSLNYDGISASDMKFAVTANNGVLKLTQATGNTLGGSFSANGTLNVAGS
CCEEECCEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEECCCEEEECCC
TPKISATNKISSVQIQPIAQMALDDDLAKGIFSMSGSYSANGNSEKALMNSAKGNIDLSL
CCCEECCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEE
ADATVRGLNLYDTLVGGVNDMLGQFQGLAAALIPNQESGKLPSPLSEDTKILDLKTKARL
ECCEECCCCHHHHHHCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHH
DKNVAYLDSLNATLSKGELSGSGWMNILNQDFDLKIGMQSPELGTSKYLQGTTWPLRCEG
CCCCHHHHHCCCHHCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCHHHCCCCCCEEEECC
NLGGSPAKWCGPDKDGFKDIGKQVAANATKDKLKDKFGIEGEGDTTEEILKDAAQKKAKD
CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
EINKQLQDGLKKLFN
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA