| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835143
Identifier: 110835143
GI number: 110835143
Start: 2600920
End: 2601243
Strand: Direct
Name: 110835143
Synonym: ABO_2282
Alternate gene names: NA
Gene position: 2600920-2601243 (Clockwise)
Preceding gene: 110835138
Following gene: 110835145
Centisome position: 83.36
GC content: 57.1
Gene sequence:
>324_bases ATGCCGATCAGCGTAGAAGCCCACACCCTTAGCGAAAATCAGTGTGAGGCCTTTGCCAAGGTGCTTCGTGATGCGCCGCA ATACCGCCAGAAGCTAGCCGATGCGGTCGCCAGCGGACAAGGGCGGTTGTTCGCCGCCCACTTCAATGGCCAGCGTGTCG CTATTGCACTCATAGAAGAAAAACAGCCCCAACTGGCCTGGATGGTAGTGCACCCAGCCACTCAAGGGCGAGGCGTAGGC AAGGATTTCCTACGCTTAATCGGTCAACAGCTGGGGGAAAATCTGACGCTGCCAGACCACTGTCAGACACAACGGTCGCT ATAG
Upstream 100 bases:
>100_bases TGCGCTCTACGGTAGCGCTTCGCTTGCTCATCTATACCTCCCAGGCATTGGACCGGCTATTATACGCACCCCAACAGGAC CTAACCAGCGGAGAGGACAG
Downstream 100 bases:
>100_bases TTAAGCCAACGGCAACTGAATATGCAGAGCAAAGCCCCGCCCGGGGCCGTCGCTCTCAGCCCACAACGCGCCGCCCACTT GTTCAATCATTACCCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPISVEAHTLSENQCEAFAKVLRDAPQYRQKLADAVASGQGRLFAAHFNGQRVAIALIEEKQPQLAWMVVHPATQGRGVG KDFLRLIGQQLGENLTLPDHCQTQRSL
Sequences:
>Translated_107_residues MPISVEAHTLSENQCEAFAKVLRDAPQYRQKLADAVASGQGRLFAAHFNGQRVAIALIEEKQPQLAWMVVHPATQGRGVG KDFLRLIGQQLGENLTLPDHCQTQRSL >Mature_106_residues PISVEAHTLSENQCEAFAKVLRDAPQYRQKLADAVASGQGRLFAAHFNGQRVAIALIEEKQPQLAWMVVHPATQGRGVGK DFLRLIGQQLGENLTLPDHCQTQRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11818; Mature: 11686
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISVEAHTLSENQCEAFAKVLRDAPQYRQKLADAVASGQGRLFAAHFNGQRVAIALIEE CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECC KQPQLAWMVVHPATQGRGVGKDFLRLIGQQLGENLTLPDHCQTQRSL CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PISVEAHTLSENQCEAFAKVLRDAPQYRQKLADAVASGQGRLFAAHFNGQRVAIALIEE CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECC KQPQLAWMVVHPATQGRGVGKDFLRLIGQQLGENLTLPDHCQTQRSL CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA