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The map label for this gene is yibQ [H]

Identifier: 110835138

GI number: 110835138

Start: 2596884

End: 2597663

Strand: Direct

Name: yibQ [H]

Synonym: ABO_2277

Alternate gene names: 110835138

Gene position: 2596884-2597663 (Clockwise)

Preceding gene: 110835137

Following gene: 110835143

Centisome position: 83.23

GC content: 58.97

Gene sequence:

>780_bases
ATGGCAAGACGCATACTGACCCTAGCCCTTCTCCTGCCCGGGCTATTGATAAGCAGCGTTAGCGGCTTAGCGGCTCCGCG
CATTGCCATTATCATCGACGACCTAGGCTACAGTCGCCAGCAAGGACAGGCCATTATCGACCTGCCCGCACCGGTGGCCT
GTGCCGTCATTCCTTTTTCTCCCCACGGGCGTCGGCTCGCGGAACGGGCTAGCCTGGCGGGCAAGGAAGTGCTGGTGCAC
ATGCCTATGGCCACGCAAGGCCACCAAAAACTCGACCGCGGTGGCCTGCAAAATGGAATGGATGAACCTCAGTTACTGGA
GGCCGTTCGTCAGGCCCTGGGCCAAATTCCACAAGCCCGCGGGCTGAATAATCATATGGGCAGCGCGCTCACCGAACAGC
CACAAACCATGGGTTGGTTAATGGCCGAACTAAAAGCGCACCAGCTTTTCTTTGTGGACAGCCGCACCAGCAGCCACACC
GTGGCGCAGCAGGTGGCCCAGCAAGTGGGACTACCCAACGCTCGGCGCGATGTCTTTCTGGATAACAACCGCAACCCAGT
GAGCATCAATCAGCAATTTAACCGACTGATACGACTGGCCCGGCAGCACGGCCAGGCCATCGCTATCGGCCACCCGTACC
CGGAAACCGTACATTATCTGCAACAGGTTTTACCGTTGATGGAAGAGGCCGGCATTGATGTGGTGCCCGTATCCTCCTTG
CTTAGCACCCCAGCGGTGACCACGGCCACCAGCCAGGCGAGCGTTAACATCCGCCCTTAA

Upstream 100 bases:

>100_bases
AACAAAAAGCCGGTTCCCTGGCCCAGGAAGATTATGCTCTGGCCCAAGCACTCTCGATTCTTAAAGGCATCGTCTTGACC
CAACGCCCAGCCATGCCCTG

Downstream 100 bases:

>100_bases
GCCCGATTTTTACCAAATGCGGGGCTGGCATAACCAACCAGCAGGAAGTCTAAACGCCAACATCCGCACGAGTAGCGACA
GCCCAATCTCAATCGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MARRILTLALLLPGLLISSVSGLAAPRIAIIIDDLGYSRQQGQAIIDLPAPVACAVIPFSPHGRRLAERASLAGKEVLVH
MPMATQGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQARGLNNHMGSALTEQPQTMGWLMAELKAHQLFFVDSRTSSHT
VAQQVAQQVGLPNARRDVFLDNNRNPVSINQQFNRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL
LSTPAVTTATSQASVNIRP

Sequences:

>Translated_259_residues
MARRILTLALLLPGLLISSVSGLAAPRIAIIIDDLGYSRQQGQAIIDLPAPVACAVIPFSPHGRRLAERASLAGKEVLVH
MPMATQGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQARGLNNHMGSALTEQPQTMGWLMAELKAHQLFFVDSRTSSHT
VAQQVAQQVGLPNARRDVFLDNNRNPVSINQQFNRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL
LSTPAVTTATSQASVNIRP
>Mature_258_residues
ARRILTLALLLPGLLISSVSGLAAPRIAIIIDDLGYSRQQGQAIIDLPAPVACAVIPFSPHGRRLAERASLAGKEVLVHM
PMATQGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQARGLNNHMGSALTEQPQTMGWLMAELKAHQLFFVDSRTSSHTV
AQQVAQQVGLPNARRDVFLDNNRNPVSINQQFNRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSLL
STPAVTTATSQASVNIRP

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=230, Percent_Identity=40.8695652173913, Blast_Score=175, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 28084; Mature: 27953

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRILTLALLLPGLLISSVSGLAAPRIAIIIDDLGYSRQQGQAIIDLPAPVACAVIPFS
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHCCCEEEECCCCCEEEEEECC
PHGRRLAERASLAGKEVLVHMPMATQGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQAR
CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCHHCCCCCCHHHHHHHHHHHHCCCCCC
GLNNHMGSALTEQPQTMGWLMAELKAHQLFFVDSRTSSHTVAQQVAQQVGLPNARRDVFL
CCCHHHCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE
DNNRNPVSINQQFNRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL
CCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH
LSTPAVTTATSQASVNIRP
HCCCCEEEECCCCEEEECC
>Mature Secondary Structure 
ARRILTLALLLPGLLISSVSGLAAPRIAIIIDDLGYSRQQGQAIIDLPAPVACAVIPFS
CHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHCCCEEEECCCCCEEEEEECC
PHGRRLAERASLAGKEVLVHMPMATQGHQKLDRGGLQNGMDEPQLLEAVRQALGQIPQAR
CCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCHHCCCCCCHHHHHHHHHHHHCCCCCC
GLNNHMGSALTEQPQTMGWLMAELKAHQLFFVDSRTSSHTVAQQVAQQVGLPNARRDVFL
CCCHHHCCHHHCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE
DNNRNPVSINQQFNRLIRLARQHGQAIAIGHPYPETVHYLQQVLPLMEEAGIDVVPVSSL
CCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEHHHH
LSTPAVTTATSQASVNIRP
HCCCCEEEECCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]