| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110636081
Identifier: 110636081
GI number: 110636081
Start: 4059308
End: 4060198
Strand: Reverse
Name: 110636081
Synonym: Meso_3756
Alternate gene names: NA
Gene position: 4060198-4059308 (Counterclockwise)
Preceding gene: 110636082
Following gene: 110636080
Centisome position: 92.02
GC content: 62.18
Gene sequence:
>891_bases ATGATGGCAGATAGCGACCCTGTCCCACCCGGTGCTCCTCGCTGCCTGCCGCCTCGACGGCTGGAGCGCACACCGCACTT TCTTCCGCCCCCCGGCAGCTGCGATGCGCATGTCCACGTCTTTGCACCCGATAGCGCAGGCCATCTGGCCGCCAGGCGCA GCTACACGCCGCATCTGGTGACACACGAGCAGTATTCCGGACTGGCCGAAAGACTCGGACTGGAACGCGCGGTACTCGTC CAGCCAAGCGTCCTTGGAACCAACAACTCCGCCCTGCTCTCCGCCTTGTCCGAACATCCTGATCTATGGCGCGGGATTGT CGTCATACCACCCGGATTGCCCGACCGAGAACTTGCCGACCTGCACATGCGGGGCGTACGCGGCACCCGCATCAATCGCA TCAACCCGGGTGGTCTGGAACTGACGGACATAGCAGCCCTGGGGCGCAGGCTGGAACCCTTTGGCTGGCATATCCAGCTT CAGATCAATATCGAAGAGATCCAGGACCTGTCGGCACTGGCCCGACAATGCCCCGTCCCGCTCGTAATCGACCACTTGGG ATTTGCACGGCCCGAAGCCGGCGCGAAGGCTGGTCCGTTCCAGTCGCTGCTGAGGGAGGTCGAAGAAGGTCGTCTCTGGG TGAAGCTTTCGGCACCATACAGGCTTAGCCGCTCCAAAGACTATGAGGACCTTCTTCCCCTGATCGACGCTCTGGTCGCC GCACGCCCGGACCGCCTCCTATGGGCCACGGACTGGCCTCACACCGGATTGTGGTCGGACATGCCCGACGATGCGGATCT GGTCGATCTCATACCGGTATGGCTACCCGACGAGGGACTGCGCCGGATGGTTCTGGTGAATAATCCGAGCGATCTGTATT GGGCAACGTAA
Upstream 100 bases:
>100_bases CTTCCGCAACGAGGATACGCGAGACTTTTTCAGGAGCAGATCCTTCAGGCGGACAGAGGCTGTGATTTCGAATTCCTCAT CCCTCCTCCGGATTCGCGAC
Downstream 100 bases:
>100_bases CGGTGCCTGGACCCGAGTCCGAATCATTCAAGAAGTAGGCGGGAATATTCAGGACAGAAACACAGGCTCCTACCTATATG GTAGTTGTCTTTGACGGTAG
Product: amidohydrolase 2
Products: NA
Alternate protein names: 2-Pyrone-4 6-Dicarboxylic Acid Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase; Amidohydrolase Family Protein; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; (2-Pyrone-4 6-)Dicarboxylic Acid Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; Transcriptional Regulator GntR; Aminohydrolase; Metal-Dependent Transmembrane Hydrolase; Metal-Dependent Hydrolase Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MMADSDPVPPGAPRCLPPRRLERTPHFLPPPGSCDAHVHVFAPDSAGHLAARRSYTPHLVTHEQYSGLAERLGLERAVLV QPSVLGTNNSALLSALSEHPDLWRGIVVIPPGLPDRELADLHMRGVRGTRINRINPGGLELTDIAALGRRLEPFGWHIQL QINIEEIQDLSALARQCPVPLVIDHLGFARPEAGAKAGPFQSLLREVEEGRLWVKLSAPYRLSRSKDYEDLLPLIDALVA ARPDRLLWATDWPHTGLWSDMPDDADLVDLIPVWLPDEGLRRMVLVNNPSDLYWAT
Sequences:
>Translated_296_residues MMADSDPVPPGAPRCLPPRRLERTPHFLPPPGSCDAHVHVFAPDSAGHLAARRSYTPHLVTHEQYSGLAERLGLERAVLV QPSVLGTNNSALLSALSEHPDLWRGIVVIPPGLPDRELADLHMRGVRGTRINRINPGGLELTDIAALGRRLEPFGWHIQL QINIEEIQDLSALARQCPVPLVIDHLGFARPEAGAKAGPFQSLLREVEEGRLWVKLSAPYRLSRSKDYEDLLPLIDALVA ARPDRLLWATDWPHTGLWSDMPDDADLVDLIPVWLPDEGLRRMVLVNNPSDLYWAT >Mature_296_residues MMADSDPVPPGAPRCLPPRRLERTPHFLPPPGSCDAHVHVFAPDSAGHLAARRSYTPHLVTHEQYSGLAERLGLERAVLV QPSVLGTNNSALLSALSEHPDLWRGIVVIPPGLPDRELADLHMRGVRGTRINRINPGGLELTDIAALGRRLEPFGWHIQL QINIEEIQDLSALARQCPVPLVIDHLGFARPEAGAKAGPFQSLLREVEEGRLWVKLSAPYRLSRSKDYEDLLPLIDALVA ARPDRLLWATDWPHTGLWSDMPDDADLVDLIPVWLPDEGLRRMVLVNNPSDLYWAT
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32867; Mature: 32867
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADSDPVPPGAPRCLPPRRLERTPHFLPPPGSCDAHVHVFAPDSAGHLAARRSYTPHLV CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCEE THEQYSGLAERLGLERAVLVQPSVLGTNNSALLSALSEHPDLWRGIVVIPPGLPDRELAD CHHHHHHHHHHHCCCEEEEECCCEECCCCHHHHHHHHHCCHHHCCEEEECCCCCCHHHHH LHMRGVRGTRINRINPGGLELTDIAALGRRLEPFGWHIQLQINIEEIQDLSALARQCPVP HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCC LVIDHLGFARPEAGAKAGPFQSLLREVEEGRLWVKLSAPYRLSRSKDYEDLLPLIDALVA EEEHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHHHHH ARPDRLLWATDWPHTGLWSDMPDDADLVDLIPVWLPDEGLRRMVLVNNPSDLYWAT CCCCCEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEECCCCCEEEC >Mature Secondary Structure MMADSDPVPPGAPRCLPPRRLERTPHFLPPPGSCDAHVHVFAPDSAGHLAARRSYTPHLV CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCCCCCEE THEQYSGLAERLGLERAVLVQPSVLGTNNSALLSALSEHPDLWRGIVVIPPGLPDRELAD CHHHHHHHHHHHCCCEEEEECCCEECCCCHHHHHHHHHCCHHHCCEEEECCCCCCHHHHH LHMRGVRGTRINRINPGGLELTDIAALGRRLEPFGWHIQLQINIEEIQDLSALARQCPVP HHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCC LVIDHLGFARPEAGAKAGPFQSLLREVEEGRLWVKLSAPYRLSRSKDYEDLLPLIDALVA EEEHHCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHHHHHHH ARPDRLLWATDWPHTGLWSDMPDDADLVDLIPVWLPDEGLRRMVLVNNPSDLYWAT CCCCCEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCEEEEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA