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The map label for this gene is rutF [H]

Identifier: 110636080

GI number: 110636080

Start: 4058696

End: 4059160

Strand: Reverse

Name: rutF [H]

Synonym: Meso_3755

Alternate gene names: 110636080

Gene position: 4059160-4058696 (Counterclockwise)

Preceding gene: 110636081

Following gene: 110636079

Centisome position: 91.99

GC content: 57.2

Gene sequence:

>465_bases
ATGCGGCGATTGGCAAGCACTGTAAGCCTTATCAGCTGCTCGGATGGCGCCGAGCGCTACGGCATAACAGTTACAGCCGT
GACCTCGGTCTGCGCCGAGCCTGCTGCCGTCCTGGTATGCGTAAACAAATCTGCGTCGATACACGATCCGCTCGTTGCAG
AAGGGAATTTTTACTTAAACCTCCTCTGCAGCAATCAGATTTCCCTGTCCGAGGCTTTCAGCGGCAAGATGAAGGGCCGC
GAGCGTTTCGAACTTGGAAAATGGGAGACGGGGCGCAATGGGCAGCCGTTCCTGGTGGATGCGCAGGCCAATCTTTTTTG
CCTCATCGACAGTGTCGTGCACTACGGGACGCATTCCGTGGTCATAGCCCGGGTAAAGGAAGTGCGCCTCGCCGAGGGCA
TCGCGCCACTCATTTATCAGGACGGCAAATATGCGGCGACCGCCCCTCTGCCGGAGTTTACTTGA

Upstream 100 bases:

>100_bases
TTCAGGACAGAAACACAGGCTCCTACCTATATGGTAGTTGTCTTTGACGGTAGGACTTCCAATGATCATAGAGGACATTC
AACACGGGTTTCGCGGCGCA

Downstream 100 bases:

>100_bases
CCGATGACAGAACCGACGCCAACCATTACCCGAGGATCACATCGCTCGTCGGTCCTAATCCGGCGCCGGTCGGCCTCACA
GAAGGCAAATCTGGACTAAA

Product: flavin reductase-like, FMN-binding

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MRRLASTVSLISCSDGAERYGITVTAVTSVCAEPAAVLVCVNKSASIHDPLVAEGNFYLNLLCSNQISLSEAFSGKMKGR
ERFELGKWETGRNGQPFLVDAQANLFCLIDSVVHYGTHSVVIARVKEVRLAEGIAPLIYQDGKYAATAPLPEFT

Sequences:

>Translated_154_residues
MRRLASTVSLISCSDGAERYGITVTAVTSVCAEPAAVLVCVNKSASIHDPLVAEGNFYLNLLCSNQISLSEAFSGKMKGR
ERFELGKWETGRNGQPFLVDAQANLFCLIDSVVHYGTHSVVIARVKEVRLAEGIAPLIYQDGKYAATAPLPEFT
>Mature_154_residues
MRRLASTVSLISCSDGAERYGITVTAVTSVCAEPAAVLVCVNKSASIHDPLVAEGNFYLNLLCSNQISLSEAFSGKMKGR
ERFELGKWETGRNGQPFLVDAQANLFCLIDSVVHYGTHSVVIARVKEVRLAEGIAPLIYQDGKYAATAPLPEFT

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081819, Length=146, Percent_Identity=31.5068493150685, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019917
- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 16624; Mature: 16624

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLASTVSLISCSDGAERYGITVTAVTSVCAEPAAVLVCVNKSASIHDPLVAEGNFYLN
CCCHHHHEEEEECCCCCCHHCEEEEHHHHHHCCCEEEEEEECCCCCCCCCEEECCCEEEE
LLCSNQISLSEAFSGKMKGRERFELGKWETGRNGQPFLVDAQANLFCLIDSVVHYGTHSV
EEECCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCHH
VIARVKEVRLAEGIAPLIYQDGKYAATAPLPEFT
EEHHHHHHHHHCCCCCEEEECCCEEEECCCCCCC
>Mature Secondary Structure
MRRLASTVSLISCSDGAERYGITVTAVTSVCAEPAAVLVCVNKSASIHDPLVAEGNFYLN
CCCHHHHEEEEECCCCCCHHCEEEEHHHHHHCCCEEEEEEECCCCCCCCCEEECCCEEEE
LLCSNQISLSEAFSGKMKGRERFELGKWETGRNGQPFLVDAQANLFCLIDSVVHYGTHSV
EEECCCCCHHHHHCCCCCCCCCEECCCCCCCCCCCCEEEECCCCEEEEEHHHHHCCCCHH
VIARVKEVRLAEGIAPLIYQDGKYAATAPLPEFT
EEHHHHHHHHHCCCCCEEEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA