| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110633074
Identifier: 110633074
GI number: 110633074
Start: 792978
End: 793541
Strand: Direct
Name: 110633074
Synonym: Meso_0717
Alternate gene names: NA
Gene position: 792978-793541 (Clockwise)
Preceding gene: 110633073
Following gene: 110633076
Centisome position: 17.97
GC content: 67.38
Gene sequence:
>564_bases ATGTCAATTGGTCTGAAACCGGTCTGGGCTGGACGAGCCCTGCGGCTCGATCCTTTTCACCTCCCGCAGGTGGTGAGCTA CGCAACTCAGGACAGTTTTGGCGAGGTGACGTTTACAATCGGCGTGCGCGGAGTCCGCATGCGCCGGGTTCTGGACAAGG CCCAGCTGCCCGTCACCTTCGCCCTGCCACCCTCCGCATTCCGCGGCGTGGCTGCCCGCGCCATCGAGGATGAGGATGGC CAGGTGACGATCACACTGGAACTTCTGCATGCCGACGCCAAGCTCTCCGTGCCGCTGCTCGTGGCCGGGGATCTTGATGA TGTGGCCGCCGATTGGCGCGCCTGGGCCGAAGCCTACCGCCTGCCGATGCTGCTGGTGGAATCCGACGGCGTGGCCCGCA CGCTCGAGGAATCGCTGGGCAACGTAAAGAAGCGCGCGGCGCAGGAGCGCCGCCAGGGCAGCACCGTGGCCCGGCGCCGT CCGCGCTTCCTGGCTCGCCGCCGCAAGGGCTCGCTCGGCCTGCGTCTGGTTGTTGATGGCGAGGAGATCACCGCCCGCGG CTGA
Upstream 100 bases:
>100_bases AAGTAAGAACCCAGGCGCTAGTCTTCCCTCCATAAGAGACCGGGTCAACTGGTCGGGGAGAACCGGGTAACCGGCTCTCG GGAGCAACAGGAAGGCACAT
Downstream 100 bases:
>100_bases TTGTCTCTACATCAGAAATAAGGGCTGATCGTCGCCCAGGCGCCTCCGCCCAGGAGCCCCAGGAAGATCAGCCAGCCCAC AACCGAGTTGGACTTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSIGLKPVWAGRALRLDPFHLPQVVSYATQDSFGEVTFTIGVRGVRMRRVLDKAQLPVTFALPPSAFRGVAARAIEDEDG QVTITLELLHADAKLSVPLLVAGDLDDVAADWRAWAEAYRLPMLLVESDGVARTLEESLGNVKKRAAQERRQGSTVARRR PRFLARRRKGSLGLRLVVDGEEITARG
Sequences:
>Translated_187_residues MSIGLKPVWAGRALRLDPFHLPQVVSYATQDSFGEVTFTIGVRGVRMRRVLDKAQLPVTFALPPSAFRGVAARAIEDEDG QVTITLELLHADAKLSVPLLVAGDLDDVAADWRAWAEAYRLPMLLVESDGVARTLEESLGNVKKRAAQERRQGSTVARRR PRFLARRRKGSLGLRLVVDGEEITARG >Mature_186_residues SIGLKPVWAGRALRLDPFHLPQVVSYATQDSFGEVTFTIGVRGVRMRRVLDKAQLPVTFALPPSAFRGVAARAIEDEDGQ VTITLELLHADAKLSVPLLVAGDLDDVAADWRAWAEAYRLPMLLVESDGVARTLEESLGNVKKRAAQERRQGSTVARRRP RFLARRRKGSLGLRLVVDGEEITARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20610; Mature: 20479
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGLKPVWAGRALRLDPFHLPQVVSYATQDSFGEVTFTIGVRGVRMRRVLDKAQLPVTF CCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE ALPPSAFRGVAARAIEDEDGQVTITLELLHADAKLSVPLLVAGDLDDVAADWRAWAEAYR ECCCHHHHHHHHHHEECCCCEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHC LPMLLVESDGVARTLEESLGNVKKRAAQERRQGSTVARRRPRFLARRRKGSLGLRLVVDG CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCEEEEECC EEITARG CEEECCC >Mature Secondary Structure SIGLKPVWAGRALRLDPFHLPQVVSYATQDSFGEVTFTIGVRGVRMRRVLDKAQLPVTF CCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCEEE ALPPSAFRGVAARAIEDEDGQVTITLELLHADAKLSVPLLVAGDLDDVAADWRAWAEAYR ECCCHHHHHHHHHHEECCCCEEEEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHC LPMLLVESDGVARTLEESLGNVKKRAAQERRQGSTVARRRPRFLARRRKGSLGLRLVVDG CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHCCCCCCEEEEECC EEITARG CEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA