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The map label for this gene is glcD [H]

Identifier: 110633073

GI number: 110633073

Start: 791349

End: 792779

Strand: Direct

Name: glcD [H]

Synonym: Meso_0716

Alternate gene names: 110633073

Gene position: 791349-792779 (Clockwise)

Preceding gene: 110633072

Following gene: 110633074

Centisome position: 17.93

GC content: 63.17

Gene sequence:

>1431_bases
ATGAACGCTGAGACGAACACGCTTGATCCAGCGCTTGCGGATCGCTTTGCGGCCATTGTCGGCGAGCGCCATGCGCTCAG
GGATGAAGGTGACATCGAGCCACATCTGGTGGAGCCGCGCGGCCTCTGGGGCGGGCGCAGCCTTCTGGTATTGAAGCCGG
GAAGCACCGAGGAGGTGAGCCGGATCTTGAAGCTCGCCACCGAGACCGGAACGCCCATCGTGCCGCAAGGCGGGAATACG
GGGCTGGTCGGCGGGCAAATGCCCGACGCGACCGGCCGCGAGGTCATTCTTTCCACTTCGCGCCTCAACCGCATCCGCGA
GGTCGACCTTTCCTCCAATACGGCCACCGTGGAGGCAGGTGTGGTGCTTCAGGTTCTCCAGGAGGAGGCGGCGAAAAACG
ACAGGCTCTTCCCCCTGTCGCTCGGCGCGCAGGGCTCCTGCCAGATTGGCGGCAATCTCTCTTCCAATGCAGGTGGCGTG
GGTGCTCTTGCCTATGGCGTGGCGCGGGACCTCTGCTTGGGGCTCGAGGTCGTGCTGCCGACAGGCGAGATCTTCGATGA
TCTTCGCAAGCTCAAGAAAGACAATACCGGCTATGATCTGAAGGATCTCTTCATCGGCGCCGAGGGCACGCTGGGCGTCA
TCACGGCGGCGGTCGTAAAGCTCTACCCGATGCCGAAGGGCCGGGATCTTGCCTGGGTCGGGCTCGGTTCGCCGGTGGAC
GCGCTGAGGCTGTTTGAGCTCGCGAACGAGAAGGCGGGCAGGGCGCTGACCATGTTCGAGCTCATCGAGAAAACGCCGCT
CGATTTCGTCCTGCGGCATATTCCGCAAGCCCGAGCTCCGCTGGCCGAAAGCCATCCCTGGAACGCCCTGATTGAAATTT
CCTCGGGGCGCTCCGCTGAAGATGCCCGCTTCCTGATGGAGGAAATCCTTGCGGCAGGCTTCGAGGCGGGCTGGGCGACC
GACGCGGTGATCGCCCAGAACGAAACGCAGCAGCTCCAGTTGCGCCAGCTGCGTGAGGACATGTCGGATGCCCAGCGCCC
CGAAGGCGGCTCCATCAAGCATGACATATCCGTGCCCGTTGCGGCCATCCCAGAGTTCATAGAGCGCGCCGCGAAAATCG
TTCAGGAGGTGGTTCCGGGGGTGCGGCCAGTCTGTTTCGGCCACATGGGCGACGGCAATCTGCATTACAATATTTCCCAG
CCAGCCGGTGCCTCGAAAGAGGAGTTTCTAACGCACTACCGCGCGATGAATGATGCCGTACATGCGCTCGTGCGGGAACT
TGGCGGCTCGTTCTCGGCCGAACACGGCATCGGCCGCATGAAACGCGCGGAACTTCTTGCCACTCAGCCGGCCGTCGCGA
CGGATCTCATGCGCCGCGTCAAGGCGGCCTTCGATCCCCAGGGCATCATGAATCCCGGCAAGGTGATCTGA

Upstream 100 bases:

>100_bases
TTGCAGTCGAGCCCGTGCCGCGGCACGGGCTGGGCGAGGCGATCAACGACCGTCTGGCCCGCGCCGCCGCGCCGAGGGAT
CAGTGAAGAGGTGACCGCCG

Downstream 100 bases:

>100_bases
GGCCGGCACTTTGGTTAGAAGGTTCTTTACAAAGCTTATTTTGTCGTAAAATGCGCGGCCGCGTGATCAGCAAAATTTAA
CTGACTTTCTAAGCCCGGAA

Product: FAD linked oxidase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MNAETNTLDPALADRFAAIVGERHALRDEGDIEPHLVEPRGLWGGRSLLVLKPGSTEEVSRILKLATETGTPIVPQGGNT
GLVGGQMPDATGREVILSTSRLNRIREVDLSSNTATVEAGVVLQVLQEEAAKNDRLFPLSLGAQGSCQIGGNLSSNAGGV
GALAYGVARDLCLGLEVVLPTGEIFDDLRKLKKDNTGYDLKDLFIGAEGTLGVITAAVVKLYPMPKGRDLAWVGLGSPVD
ALRLFELANEKAGRALTMFELIEKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRSAEDARFLMEEILAAGFEAGWAT
DAVIAQNETQQLQLRQLREDMSDAQRPEGGSIKHDISVPVAAIPEFIERAAKIVQEVVPGVRPVCFGHMGDGNLHYNISQ
PAGASKEEFLTHYRAMNDAVHALVRELGGSFSAEHGIGRMKRAELLATQPAVATDLMRRVKAAFDPQGIMNPGKVI

Sequences:

>Translated_476_residues
MNAETNTLDPALADRFAAIVGERHALRDEGDIEPHLVEPRGLWGGRSLLVLKPGSTEEVSRILKLATETGTPIVPQGGNT
GLVGGQMPDATGREVILSTSRLNRIREVDLSSNTATVEAGVVLQVLQEEAAKNDRLFPLSLGAQGSCQIGGNLSSNAGGV
GALAYGVARDLCLGLEVVLPTGEIFDDLRKLKKDNTGYDLKDLFIGAEGTLGVITAAVVKLYPMPKGRDLAWVGLGSPVD
ALRLFELANEKAGRALTMFELIEKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRSAEDARFLMEEILAAGFEAGWAT
DAVIAQNETQQLQLRQLREDMSDAQRPEGGSIKHDISVPVAAIPEFIERAAKIVQEVVPGVRPVCFGHMGDGNLHYNISQ
PAGASKEEFLTHYRAMNDAVHALVRELGGSFSAEHGIGRMKRAELLATQPAVATDLMRRVKAAFDPQGIMNPGKVI
>Mature_476_residues
MNAETNTLDPALADRFAAIVGERHALRDEGDIEPHLVEPRGLWGGRSLLVLKPGSTEEVSRILKLATETGTPIVPQGGNT
GLVGGQMPDATGREVILSTSRLNRIREVDLSSNTATVEAGVVLQVLQEEAAKNDRLFPLSLGAQGSCQIGGNLSSNAGGV
GALAYGVARDLCLGLEVVLPTGEIFDDLRKLKKDNTGYDLKDLFIGAEGTLGVITAAVVKLYPMPKGRDLAWVGLGSPVD
ALRLFELANEKAGRALTMFELIEKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRSAEDARFLMEEILAAGFEAGWAT
DAVIAQNETQQLQLRQLREDMSDAQRPEGGSIKHDISVPVAAIPEFIERAAKIVQEVVPGVRPVCFGHMGDGNLHYNISQ
PAGASKEEFLTHYRAMNDAVHALVRELGGSFSAEHGIGRMKRAELLATQPAVATDLMRRVKAAFDPQGIMNPGKVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=437, Percent_Identity=39.3592677345538, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI37595756, Length=467, Percent_Identity=30.8351177730193, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI37595754, Length=490, Percent_Identity=29.1836734693878, Blast_Score=155, Evalue=9e-38,
Organism=Homo sapiens, GI4501993, Length=212, Percent_Identity=32.5471698113208, Blast_Score=91, Evalue=2e-18,
Organism=Escherichia coli, GI1789351, Length=477, Percent_Identity=31.0272536687631, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1787977, Length=505, Percent_Identity=26.5346534653465, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI48994907, Length=230, Percent_Identity=27.3913043478261, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17534361, Length=470, Percent_Identity=32.9787234042553, Blast_Score=231, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI71992373, Length=457, Percent_Identity=28.4463894967177, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI71992381, Length=457, Percent_Identity=27.1334792122538, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI71992392, Length=374, Percent_Identity=27.5401069518717, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17556096, Length=180, Percent_Identity=28.3333333333333, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6320023, Length=473, Percent_Identity=35.7293868921776, Blast_Score=295, Evalue=1e-80,
Organism=Saccharomyces cerevisiae, GI6320764, Length=442, Percent_Identity=34.3891402714932, Blast_Score=261, Evalue=1e-70,
Organism=Saccharomyces cerevisiae, GI6320027, Length=446, Percent_Identity=29.372197309417, Blast_Score=166, Evalue=6e-42,
Organism=Drosophila melanogaster, GI18921117, Length=464, Percent_Identity=36.6379310344828, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24639277, Length=464, Percent_Identity=36.6379310344828, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24639275, Length=464, Percent_Identity=36.6379310344828, Blast_Score=269, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24653753, Length=182, Percent_Identity=29.1208791208791, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51084; Mature: 51084

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAETNTLDPALADRFAAIVGERHALRDEGDIEPHLVEPRGLWGGRSLLVLKPGSTEEVS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHH
RILKLATETGTPIVPQGGNTGLVGGQMPDATGREVILSTSRLNRIREVDLSSNTATVEAG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEHHH
VVLQVLQEEAAKNDRLFPLSLGAQGSCQIGGNLSSNAGGVGALAYGVARDLCLGLEVVLP
HHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC
TGEIFDDLRKLKKDNTGYDLKDLFIGAEGTLGVITAAVVKLYPMPKGRDLAWVGLGSPVD
CHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
ALRLFELANEKAGRALTMFELIEKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRSAE
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCEEEEECCCCCHH
DARFLMEEILAAGFEAGWATDAVIAQNETQQLQLRQLREDMSDAQRPEGGSIKHDISVPV
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCH
AAIPEFIERAAKIVQEVVPGVRPVCFGHMGDGNLHYNISQPAGASKEEFLTHYRAMNDAV
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
HALVRELGGSFSAEHGIGRMKRAELLATQPAVATDLMRRVKAAFDPQGIMNPGKVI
HHHHHHHCCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNAETNTLDPALADRFAAIVGERHALRDEGDIEPHLVEPRGLWGGRSLLVLKPGSTEEVS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCHHHHH
RILKLATETGTPIVPQGGNTGLVGGQMPDATGREVILSTSRLNRIREVDLSSNTATVEAG
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCEEEHHH
VVLQVLQEEAAKNDRLFPLSLGAQGSCQIGGNLSSNAGGVGALAYGVARDLCLGLEVVLP
HHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEC
TGEIFDDLRKLKKDNTGYDLKDLFIGAEGTLGVITAAVVKLYPMPKGRDLAWVGLGSPVD
CHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHH
ALRLFELANEKAGRALTMFELIEKTPLDFVLRHIPQARAPLAESHPWNALIEISSGRSAE
HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCHHCCCCCCCCCCCEEEEECCCCCHH
DARFLMEEILAAGFEAGWATDAVIAQNETQQLQLRQLREDMSDAQRPEGGSIKHDISVPV
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCH
AAIPEFIERAAKIVQEVVPGVRPVCFGHMGDGNLHYNISQPAGASKEEFLTHYRAMNDAV
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
HALVRELGGSFSAEHGIGRMKRAELLATQPAVATDLMRRVKAAFDPQGIMNPGKVI
HHHHHHHCCCCCCHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]