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The map label for this gene is 110632870

Identifier: 110632870

GI number: 110632870

Start: 563791

End: 564060

Strand: Direct

Name: 110632870

Synonym: Meso_0510

Alternate gene names: NA

Gene position: 563791-564060 (Clockwise)

Preceding gene: 110632858

Following gene: 110632871

Centisome position: 12.78

GC content: 63.7

Gene sequence:

>270_bases
ATGATACTTTCCCGTTCGGTAAATATCATGGCCAGACGCAACCTCACCACCGCCGAGATCGGCGACATTGTCCGGACAAC
CCGCAAGGCCGCTGGCCTGCGGCAGGACGAGCTTGCCGGCGCAGCTGGCGTCGGCCTGCGCTTCATCGTCGATCTCGAAG
CGGGCAAGCCGACCGCGCAGATCGGCAAGACACTTCAGGTCCTAGCCGCGTTGGGCTGCTCGCTCGATATCACACCGCCG
CCCGATCCCAAAGGAGCGCGGAAGGGATGA

Upstream 100 bases:

>100_bases
CGGCGCGTTTTCCCGAGCGGGAATAATTCAGACCCAGGAGCTACCCCGAGGCGCAAGCTTTCCCGAGCGGGAAATTCTTA
TAGACATTCTTCAGAAATCC

Downstream 100 bases:

>100_bases
CGCGCACCCTCGATATCTGGTGGGACGGGCGCCTGGTGGGTCAGCTGACGCAGGACAAGCATGGTGAACTCGGCTTCGCC
TATGCGCGGGCTTGGCTCGA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MILSRSVNIMARRNLTTAEIGDIVRTTRKAAGLRQDELAGAAGVGLRFIVDLEAGKPTAQIGKTLQVLAALGCSLDITPP
PDPKGARKG

Sequences:

>Translated_89_residues
MILSRSVNIMARRNLTTAEIGDIVRTTRKAAGLRQDELAGAAGVGLRFIVDLEAGKPTAQIGKTLQVLAALGCSLDITPP
PDPKGARKG
>Mature_89_residues
MILSRSVNIMARRNLTTAEIGDIVRTTRKAAGLRQDELAGAAGVGLRFIVDLEAGKPTAQIGKTLQVLAALGCSLDITPP
PDPKGARKG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR017507 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 9294; Mature: 9294

Theoretical pI: Translated: 10.91; Mature: 10.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSRSVNIMARRNLTTAEIGDIVRTTRKAAGLRQDELAGAAGVGLRFIVDLEAGKPTAQ
CCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCHHH
IGKTLQVLAALGCSLDITPPPDPKGARKG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILSRSVNIMARRNLTTAEIGDIVRTTRKAAGLRQDELAGAAGVGLRFIVDLEAGKPTAQ
CCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEEECCCCCHHH
IGKTLQVLAALGCSLDITPPPDPKGARKG
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]