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The map label for this gene is dppC [H]

Identifier: 110632822

GI number: 110632822

Start: 508998

End: 509855

Strand: Direct

Name: dppC [H]

Synonym: Meso_0461

Alternate gene names: 110632822

Gene position: 508998-509855 (Clockwise)

Preceding gene: 110632821

Following gene: 110632823

Centisome position: 11.54

GC content: 65.27

Gene sequence:

>858_bases
ATGACCGTCCTTGCCGAGCCGCAGGCGGAGCGCACCCGCCGCACCCGCCGGTCACTTACGTTCAGCATCGGCCTGATTTT
GGTCGGCTTGCATTTGGCAGTGGCGCTTTTGACGCTGGTCTGGACGCCCTATGACCCGACGGGCATGGCAGGCGGGCGGC
TGGAGGCGCCGTCCTGGGCGCATCCGGCGGGAACCGACAGGCTGGGCCGCGATCTCTTCACGCAGATCATGATCGGCTCG
CGCATCGCTTTGGTTGTCGGTGCCGGGGCGGTGGCGATCGCGGCGGCAATCGGGGTAACGCTCGGCGTGTTGGCGGCCTT
CGCCACCCGCTATCTAGACGACGCATTGGCCGCCACCTTCGATATTCTCATCGCCTTCCCAACGCTTCTGCTTGCCATGC
TCGTCGTGGCTGCAACGGGAAATGCAAGTCTCCTCTCAGCCATTTTGGCGCTGGGTATCGCGATCTCGGCCATTGTCGCA
CGGTTGACGCGCATCCTGGTAAAGCGTGTGCTGGCGATGGATTATATTACGGCCGCCCGTACCGCCGGGTCCTCCTGGCC
GAGCATCGTATTCCGCCATGTCCTCCCCAATATCTGGCCGACACTCTCGGTCAATTTCGCACTCCAGTTCGGGCTGGCCG
TTATCGCAGAGGCTTCGCTCTCCTATCTCGGCCTGGGCGCGCCGCCTCCCAATGCGTCCTGGGGGCGTCTCCTGCAGGAG
GCGCAGGGCACGGTCTACACCGCTCCATTCGGCGCAGTCGCGCCGGGCCTCGCGCTGGTCTCGCTGGTGATCGGCATGAA
CCTCCTCGCCGATGGCCTGCGCGACATAGGCGATCCGACACGGAGGCGCGCGCGATGA

Upstream 100 bases:

>100_bases
TCATTTCCACGTTGCTCGTGCTGCTTATCGGATTCTTCGCCGATCTTGCCCAGCGCTGGATCGATCCGCGCCTGCGCGAA
AAGCTGGGGAATATACGTCG

Downstream 100 bases:

>100_bases
GCCTGCTTGTGATCGAAGGGCTCACGCTGGAAAGCAGCGGGCAGAACCTGGTTTCCAATCTCTCGCTCGCGGTGGGGCCA
GGCGCGCGCCTGGGGCTGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MTVLAEPQAERTRRTRRSLTFSIGLILVGLHLAVALLTLVWTPYDPTGMAGGRLEAPSWAHPAGTDRLGRDLFTQIMIGS
RIALVVGAGAVAIAAAIGVTLGVLAAFATRYLDDALAATFDILIAFPTLLLAMLVVAATGNASLLSAILALGIAISAIVA
RLTRILVKRVLAMDYITAARTAGSSWPSIVFRHVLPNIWPTLSVNFALQFGLAVIAEASLSYLGLGAPPPNASWGRLLQE
AQGTVYTAPFGAVAPGLALVSLVIGMNLLADGLRDIGDPTRRRAR

Sequences:

>Translated_285_residues
MTVLAEPQAERTRRTRRSLTFSIGLILVGLHLAVALLTLVWTPYDPTGMAGGRLEAPSWAHPAGTDRLGRDLFTQIMIGS
RIALVVGAGAVAIAAAIGVTLGVLAAFATRYLDDALAATFDILIAFPTLLLAMLVVAATGNASLLSAILALGIAISAIVA
RLTRILVKRVLAMDYITAARTAGSSWPSIVFRHVLPNIWPTLSVNFALQFGLAVIAEASLSYLGLGAPPPNASWGRLLQE
AQGTVYTAPFGAVAPGLALVSLVIGMNLLADGLRDIGDPTRRRAR
>Mature_284_residues
TVLAEPQAERTRRTRRSLTFSIGLILVGLHLAVALLTLVWTPYDPTGMAGGRLEAPSWAHPAGTDRLGRDLFTQIMIGSR
IALVVGAGAVAIAAAIGVTLGVLAAFATRYLDDALAATFDILIAFPTLLLAMLVVAATGNASLLSAILALGIAISAIVAR
LTRILVKRVLAMDYITAARTAGSSWPSIVFRHVLPNIWPTLSVNFALQFGLAVIAEASLSYLGLGAPPPNASWGRLLQEA
QGTVYTAPFGAVAPGLALVSLVIGMNLLADGLRDIGDPTRRRAR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=276, Percent_Identity=38.0434782608696, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1787760, Length=250, Percent_Identity=35.6, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=32.0833333333333, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=36.2903225806452, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787549, Length=287, Percent_Identity=34.4947735191638, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1787498, Length=222, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29852; Mature: 29720

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLAEPQAERTRRTRRSLTFSIGLILVGLHLAVALLTLVWTPYDPTGMAGGRLEAPSWA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
HPAGTDRLGRDLFTQIMIGSRIALVVGAGAVAIAAAIGVTLGVLAAFATRYLDDALAATF
CCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILIAFPTLLLAMLVVAATGNASLLSAILALGIAISAIVARLTRILVKRVLAMDYITAAR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGSSWPSIVFRHVLPNIWPTLSVNFALQFGLAVIAEASLSYLGLGAPPPNASWGRLLQE
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
AQGTVYTAPFGAVAPGLALVSLVIGMNLLADGLRDIGDPTRRRAR
HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
TVLAEPQAERTRRTRRSLTFSIGLILVGLHLAVALLTLVWTPYDPTGMAGGRLEAPSWA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
HPAGTDRLGRDLFTQIMIGSRIALVVGAGAVAIAAAIGVTLGVLAAFATRYLDDALAATF
CCCCCHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILIAFPTLLLAMLVVAATGNASLLSAILALGIAISAIVARLTRILVKRVLAMDYITAAR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGSSWPSIVFRHVLPNIWPTLSVNFALQFGLAVIAEASLSYLGLGAPPPNASWGRLLQE
HCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
AQGTVYTAPFGAVAPGLALVSLVIGMNLLADGLRDIGDPTRRRAR
HCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]