| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiC [H]
Identifier: 110632821
GI number: 110632821
Start: 508087
End: 509001
Strand: Direct
Name: gsiC [H]
Synonym: Meso_0460
Alternate gene names: 110632821
Gene position: 508087-509001 (Clockwise)
Preceding gene: 110632820
Following gene: 110632822
Centisome position: 11.51
GC content: 63.06
Gene sequence:
>915_bases GTGGCGAGCATCGTTCTTTTCGTTCTGCTGCGTCTCCTTCCGGGAGATCCCGCCAACGCGCTCGTTTCGGTAGGCGCCGA TCCGGCGCAGATCGAGGCAGCGCGCCGCCAGGTCGGCTCCGACCTGCCGCTCGCGCAACAGTTCCTGCAGTTTCTCACCA GCCTGGCCCGGCTCGACCTTGGCACGTCCTTCGTCAGCCGCACGTCCGTGCTTCAGGAGATCCTGGCCCGCCTGGCGGTC ACCGTGCCGCTGACTTTGCTTTCCTTCATGCTTGCCGTGCTGATCGCGGTGCCGCTCGGTATACTGTCCGCGGTCAAGGC GGAGCGCTGGTTTGGCGCCCTGATATCCGTGATCTCGCAGCTCGGCATCGCCATTCCCGTTTTTTGGGTCGGCATTCTCC TCGTGACGCTTTTTGCGGTGAACCTGCGGCTCTTTCCTTCCGGCGGCTTTCCCCCGCAGGGCTGGGCCGCCCCCTTTGAG GCGCTTCGGGCGCTGTTTCTCCCAATCGTGACGATTGCCGTCGTCATGTCCGCTTCGCTGTTGCGCTATGTCCGCTCGGC TACGCAGGACGTGCTGGGCAGCGACTATCTGCGCACGGCGCGGGCACTTGGTTCGGGCTTTGCGGAAGCGCTCATTCGAC ATGGCATCCGCAATGGCGCGGTGCCGGTAGTTTCTATCCTCGGCATCGAGCTTGCGACGACGCTTCTGGGAGCGGTGGTG GTGGAGCGCGTATTCACGCTGCCGGGCTTGGGCTCCATGCTGCTTCTCGCAATCGAGCAGCGTGATTATCCCAACATCCA GGGCGTGCTCTTCATTTCCACGTTGCTCGTGCTGCTTATCGGATTCTTCGCCGATCTTGCCCAGCGCTGGATCGATCCGC GCCTGCGCGAAAAGCTGGGGAATATACGTCGATGA
Upstream 100 bases:
>100_bases ACCAAGCGCGCGCAGTAGTCGTTCAGGCGAGCCGCGGAAGGAGGGGCCAATCCTCGCTTACATTATCCGTCGGCTCGCCA TCCTCCTTTTCTCGCTCCTT
Downstream 100 bases:
>100_bases CCGTCCTTGCCGAGCCGCAGGCGGAGCGCACCCGCCGCACCCGCCGGTCACTTACGTTCAGCATCGGCCTGATTTTGGTC GGCTTGCATTTGGCAGTGGC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MASIVLFVLLRLLPGDPANALVSVGADPAQIEAARRQVGSDLPLAQQFLQFLTSLARLDLGTSFVSRTSVLQEILARLAV TVPLTLLSFMLAVLIAVPLGILSAVKAERWFGALISVISQLGIAIPVFWVGILLVTLFAVNLRLFPSGGFPPQGWAAPFE ALRALFLPIVTIAVVMSASLLRYVRSATQDVLGSDYLRTARALGSGFAEALIRHGIRNGAVPVVSILGIELATTLLGAVV VERVFTLPGLGSMLLLAIEQRDYPNIQGVLFISTLLVLLIGFFADLAQRWIDPRLREKLGNIRR
Sequences:
>Translated_304_residues MASIVLFVLLRLLPGDPANALVSVGADPAQIEAARRQVGSDLPLAQQFLQFLTSLARLDLGTSFVSRTSVLQEILARLAV TVPLTLLSFMLAVLIAVPLGILSAVKAERWFGALISVISQLGIAIPVFWVGILLVTLFAVNLRLFPSGGFPPQGWAAPFE ALRALFLPIVTIAVVMSASLLRYVRSATQDVLGSDYLRTARALGSGFAEALIRHGIRNGAVPVVSILGIELATTLLGAVV VERVFTLPGLGSMLLLAIEQRDYPNIQGVLFISTLLVLLIGFFADLAQRWIDPRLREKLGNIRR >Mature_303_residues ASIVLFVLLRLLPGDPANALVSVGADPAQIEAARRQVGSDLPLAQQFLQFLTSLARLDLGTSFVSRTSVLQEILARLAVT VPLTLLSFMLAVLIAVPLGILSAVKAERWFGALISVISQLGIAIPVFWVGILLVTLFAVNLRLFPSGGFPPQGWAAPFEA LRALFLPIVTIAVVMSASLLRYVRSATQDVLGSDYLRTARALGSGFAEALIRHGIRNGAVPVVSILGIELATTLLGAVVV ERVFTLPGLGSMLLLAIEQRDYPNIQGVLFISTLLVLLIGFFADLAQRWIDPRLREKLGNIRR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=296, Percent_Identity=36.4864864864865, Blast_Score=194, Evalue=5e-51, Organism=Escherichia coli, GI1789965, Length=319, Percent_Identity=30.4075235109718, Blast_Score=171, Evalue=6e-44, Organism=Escherichia coli, GI1787761, Length=320, Percent_Identity=34.0625, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1789888, Length=302, Percent_Identity=32.1192052980132, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1787497, Length=292, Percent_Identity=29.4520547945205, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1787550, Length=277, Percent_Identity=28.158844765343, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788504, Length=280, Percent_Identity=30.7142857142857, Blast_Score=113, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32725; Mature: 32593
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIVLFVLLRLLPGDPANALVSVGADPAQIEAARRQVGSDLPLAQQFLQFLTSLARLDL CHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GTSFVSRTSVLQEILARLAVTVPLTLLSFMLAVLIAVPLGILSAVKAERWFGALISVISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAIPVFWVGILLVTLFAVNLRLFPSGGFPPQGWAAPFEALRALFLPIVTIAVVMSASL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRYVRSATQDVLGSDYLRTARALGSGFAEALIRHGIRNGAVPVVSILGIELATTLLGAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VERVFTLPGLGSMLLLAIEQRDYPNIQGVLFISTLLVLLIGFFADLAQRWIDPRLREKLG HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC NIRR CCCC >Mature Secondary Structure ASIVLFVLLRLLPGDPANALVSVGADPAQIEAARRQVGSDLPLAQQFLQFLTSLARLDL HHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GTSFVSRTSVLQEILARLAVTVPLTLLSFMLAVLIAVPLGILSAVKAERWFGALISVISQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAIPVFWVGILLVTLFAVNLRLFPSGGFPPQGWAAPFEALRALFLPIVTIAVVMSASL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LRYVRSATQDVLGSDYLRTARALGSGFAEALIRHGIRNGAVPVVSILGIELATTLLGAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VERVFTLPGLGSMLLLAIEQRDYPNIQGVLFISTLLVLLIGFFADLAQRWIDPRLREKLG HHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC NIRR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]