| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is kbl [C]
Identifier: 110632804
GI number: 110632804
Start: 489766
End: 490953
Strand: Direct
Name: kbl [C]
Synonym: Meso_0443
Alternate gene names: 110632804
Gene position: 489766-490953 (Clockwise)
Preceding gene: 110632800
Following gene: 110632805
Centisome position: 11.1
GC content: 60.44
Gene sequence:
>1188_bases ATGACCGCTTCCTTTCTTCAGTATTTGTCCCGCGAAGTCGACGGCTTGAAAGAGGCCGGGCTCTATAAGAGCGAGCGCGT GATCACCTCCATGCAATCCGCCAGGATCGAGAGCGGCGGCAAGAGGGTTCTCAATTTCTGTGCCAACAATTATCTGGGCC TCGCCGACAATGAGGAATTGCGCGAGGCCGCCAAGGCAGCGCTCGACCGCTATGGCTATGGCATGGCCTCCGTCCGCTTC ATCTGCGGCACGCAGGAGGAACACAAGGCGCTGGAGAAGCGCATTTCCTCTTTCCTGGGGTATGAGGATACGATCCTCTA TTCATCCTGCTTCGACGCCAATGCGGGGCTTTTCGAAACGCTGCTGGCGCCTGAGGACGCGATCATCTCCGACGCGCTCA ACCATGCGTCGATCATCGATGGAGTCCGGCTCTGCAAGGCACGCCGCTATCGCTATGCGAACAACGATATGGGAGAATTG GAGGAGCGGCTGAAAGAGGCCGCCGATGCCCGCTTCCGCCTCATCGCCACCGACGGCGTGTTCTCCATGGACGGCATCAT TGCCAATCTGAAGGCGATTTGCGATCTGGCTGAAAAATATGATGCCATGGTGATGGTGGATGACAGCCACGCGGTGGGCT TCGTCGGCGCGCACGGGCGCGGCACGCCGGAATATTGCGGCGTCGAAGGCCGGGTCGATATTGCTACCGGCACGCTCGGG AAGGCTCTGGGCGGCGCTTCCGGCGGCTATACCAGCGGTAAGAAAGAGGTGGTCGAGTGGCTGCGGCAGCGCTCGCGCCC CTATCTTTTCTCCAACACGCTGGCGCCCGTCATCGCCGCGGCTTCCCTTAAGGTGTTCGAAATTGTCGAGAACGGCGACG AGTTGCGCCGGAGGCTCTATGAAAATGCGGATCGCTTCCGCGACAGGATGACGAAGCTTGGCTTTACATTGGCCGGCAGC GGGCATCCGATCATCCCCGTTATGATCGGTGAGGCCGGGCTGGCCGCGAAAATGGCCGAGCGCCTTCTGGACTACGGGAT TTACGTGATCGGCTTTTCCTTTCCCGTGGTGCCCAAGGGCGAGGCACGCATCCGAACCCAAATGTCCGCCGCCCACTCGG CTGAGGATATCGACCGCGCTGTGGAGGCTTTCGGCAAGGTGGGCAGGGAGCTGGGGGTGATTTCATGA
Upstream 100 bases:
>100_bases GACCGCAGCTCCGCATTTGACGGATGGCGCGCGACATGTCTAAGCGAATAGCCCTAAACGGTCCGCTGCGGCGGTCTGTG ATGTTGCCGATGAGGTTTAT
Downstream 100 bases:
>100_bases TGCGGTTGCCTTCGATGTTTACGTTCCATCACGTGGAGATCATCTCATGACCAACATGATGAAGGCCTTGGTGAAGGCCA AGCCCGAGGAAGGGCTTTGG
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTASFLQYLSREVDGLKEAGLYKSERVITSMQSARIESGGKRVLNFCANNYLGLADNEELREAAKAALDRYGYGMASVRF ICGTQEEHKALEKRISSFLGYEDTILYSSCFDANAGLFETLLAPEDAIISDALNHASIIDGVRLCKARRYRYANNDMGEL EERLKEAADARFRLIATDGVFSMDGIIANLKAICDLAEKYDAMVMVDDSHAVGFVGAHGRGTPEYCGVEGRVDIATGTLG KALGGASGGYTSGKKEVVEWLRQRSRPYLFSNTLAPVIAAASLKVFEIVENGDELRRRLYENADRFRDRMTKLGFTLAGS GHPIIPVMIGEAGLAAKMAERLLDYGIYVIGFSFPVVPKGEARIRTQMSAAHSAEDIDRAVEAFGKVGRELGVIS
Sequences:
>Translated_395_residues MTASFLQYLSREVDGLKEAGLYKSERVITSMQSARIESGGKRVLNFCANNYLGLADNEELREAAKAALDRYGYGMASVRF ICGTQEEHKALEKRISSFLGYEDTILYSSCFDANAGLFETLLAPEDAIISDALNHASIIDGVRLCKARRYRYANNDMGEL EERLKEAADARFRLIATDGVFSMDGIIANLKAICDLAEKYDAMVMVDDSHAVGFVGAHGRGTPEYCGVEGRVDIATGTLG KALGGASGGYTSGKKEVVEWLRQRSRPYLFSNTLAPVIAAASLKVFEIVENGDELRRRLYENADRFRDRMTKLGFTLAGS GHPIIPVMIGEAGLAAKMAERLLDYGIYVIGFSFPVVPKGEARIRTQMSAAHSAEDIDRAVEAFGKVGRELGVIS >Mature_394_residues TASFLQYLSREVDGLKEAGLYKSERVITSMQSARIESGGKRVLNFCANNYLGLADNEELREAAKAALDRYGYGMASVRFI CGTQEEHKALEKRISSFLGYEDTILYSSCFDANAGLFETLLAPEDAIISDALNHASIIDGVRLCKARRYRYANNDMGELE ERLKEAADARFRLIATDGVFSMDGIIANLKAICDLAEKYDAMVMVDDSHAVGFVGAHGRGTPEYCGVEGRVDIATGTLGK ALGGASGGYTSGKKEVVEWLRQRSRPYLFSNTLAPVIAAASLKVFEIVENGDELRRRLYENADRFRDRMTKLGFTLAGSG HPIIPVMIGEAGLAAKMAERLLDYGIYVIGFSFPVVPKGEARIRTQMSAAHSAEDIDRAVEAFGKVGRELGVIS
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=390, Percent_Identity=56.4102564102564, Blast_Score=447, Evalue=1e-125, Organism=Homo sapiens, GI284448556, Length=414, Percent_Identity=53.1400966183575, Blast_Score=438, Evalue=1e-123, Organism=Homo sapiens, GI83977442, Length=364, Percent_Identity=33.7912087912088, Blast_Score=214, Evalue=8e-56, Organism=Homo sapiens, GI83977440, Length=364, Percent_Identity=33.7912087912088, Blast_Score=214, Evalue=9e-56, Organism=Homo sapiens, GI83977444, Length=364, Percent_Identity=33.7912087912088, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI4758668, Length=366, Percent_Identity=34.1530054644809, Blast_Score=198, Evalue=8e-51, Organism=Homo sapiens, GI119220554, Length=366, Percent_Identity=33.6065573770492, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI4502025, Length=360, Percent_Identity=31.9444444444444, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI40316939, Length=360, Percent_Identity=31.9444444444444, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI5454084, Length=275, Percent_Identity=29.8181818181818, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1790046, Length=398, Percent_Identity=69.5979899497487, Blast_Score=567, Evalue=1e-163, Organism=Escherichia coli, GI1786993, Length=347, Percent_Identity=32.5648414985591, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71994529, Length=397, Percent_Identity=56.4231738035265, Blast_Score=455, Evalue=1e-128, Organism=Caenorhabditis elegans, GI32566772, Length=369, Percent_Identity=32.520325203252, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17560914, Length=364, Percent_Identity=32.6923076923077, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17560912, Length=364, Percent_Identity=32.6923076923077, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI71982617, Length=296, Percent_Identity=26.6891891891892, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71982625, Length=296, Percent_Identity=26.6891891891892, Blast_Score=105, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320438, Length=375, Percent_Identity=30.9333333333333, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6320267, Length=370, Percent_Identity=32.1621621621622, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6323954, Length=280, Percent_Identity=27.1428571428571, Blast_Score=116, Evalue=6e-27, Organism=Drosophila melanogaster, GI24662918, Length=394, Percent_Identity=60.6598984771574, Blast_Score=497, Evalue=1e-141, Organism=Drosophila melanogaster, GI17137420, Length=379, Percent_Identity=31.1345646437995, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI17136286, Length=377, Percent_Identity=32.6259946949602, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24653280, Length=393, Percent_Identity=25.1908396946565, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24653276, Length=393, Percent_Identity=25.1908396946565, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24653278, Length=393, Percent_Identity=25.1908396946565, Blast_Score=115, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 43168; Mature: 43036
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASFLQYLSREVDGLKEAGLYKSERVITSMQSARIESGGKRVLNFCANNYLGLADNEEL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH REAAKAALDRYGYGMASVRFICGTQEEHKALEKRISSFLGYEDTILYSSCFDANAGLFET HHHHHHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCHHHHH LLAPEDAIISDALNHASIIDGVRLCKARRYRYANNDMGELEERLKEAADARFRLIATDGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCC FSMDGIIANLKAICDLAEKYDAMVMVDDSHAVGFVGAHGRGTPEYCGVEGRVDIATGTLG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCHHH KALGGASGGYTSGKKEVVEWLRQRSRPYLFSNTLAPVIAAASLKVFEIVENGDELRRRLY HHHCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ENADRFRDRMTKLGFTLAGSGHPIIPVMIGEAGLAAKMAERLLDYGIYVIGFSFPVVPKG HHHHHHHHHHHHHCEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCC EARIRTQMSAAHSAEDIDRAVEAFGKVGRELGVIS CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TASFLQYLSREVDGLKEAGLYKSERVITSMQSARIESGGKRVLNFCANNYLGLADNEEL CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHH REAAKAALDRYGYGMASVRFICGTQEEHKALEKRISSFLGYEDTILYSSCFDANAGLFET HHHHHHHHHHHCCCHHHHHEEECCCHHHHHHHHHHHHHCCCCHHEEEHHCCCCCCHHHHH LLAPEDAIISDALNHASIIDGVRLCKARRYRYANNDMGELEERLKEAADARFRLIATDGV HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEEECCC FSMDGIIANLKAICDLAEKYDAMVMVDDSHAVGFVGAHGRGTPEYCGVEGRVDIATGTLG HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEECCHHH KALGGASGGYTSGKKEVVEWLRQRSRPYLFSNTLAPVIAAASLKVFEIVENGDELRRRLY HHHCCCCCCCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ENADRFRDRMTKLGFTLAGSGHPIIPVMIGEAGLAAKMAERLLDYGIYVIGFSFPVVPKG HHHHHHHHHHHHHCEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCC EARIRTQMSAAHSAEDIDRAVEAFGKVGRELGVIS CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]