Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632703
Identifier: 110632703
GI number: 110632703
Start: 382220
End: 382684
Strand: Direct
Name: 110632703
Synonym: Meso_0342
Alternate gene names: NA
Gene position: 382220-382684 (Clockwise)
Preceding gene: 110632701
Following gene: 110632710
Centisome position: 8.66
GC content: 58.49
Gene sequence:
>465_bases ATGCAGGATCTGCTTACGGTTATGGCAATCTGGCTTTCAGTCAATTTCGGCCTGCCGGCAATCGATGAAAAGCCTCGTAT CGAATTTGTCTCGGCGGCCAGGATGGCTGAGGTGCGCCGCGAGCGGCTGGCGGCAGAGCGCTCGCATGGGGTGGTTGAGA TCGGGCAAGGCACGTCGCCCGACACGGGCCACGAATTTCACGCAATCTATGACGATGTCAGCCGCACGATCTATCTGCCT TCAGACTGGACACCCGCCTCGTCGGCCCATGTCTCAATGCTGCTGCATGAGATGGTCCATCATCTCCAGAACGCCGGCGC ACTGAAATACGAGTGCTCCGAGGCGCGCGAACGCCCCGCCTATCAAGCCCAGGCGCGGTGGCTGGAGCTGTTCGGCAAAA AGCTGGAGGAAGAATTCAAGATCGATCCGATGACCATTCTGGTGCGAACGAGCTGCATGTATTGA
Upstream 100 bases:
>100_bases GACCTTGGTCGCAGGACTGCCGCATGATTCACGAATGGCAGAGGGTCCGCCATCCTTTCGCTGAGACCGGCAACCACCGC TGCGGTCATGGAGGCAAGCG
Downstream 100 bases:
>100_bases GCCATCGCACCCAGGCGCATCGGGGCGGCGCTGATCATCGCCGCCGGAAGAGCTGGCGCCAGAAGTCGAAGGTCGCCAAC AGGAAGCAGAGAACGGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQDLLTVMAIWLSVNFGLPAIDEKPRIEFVSAARMAEVRRERLAAERSHGVVEIGQGTSPDTGHEFHAIYDDVSRTIYLP SDWTPASSAHVSMLLHEMVHHLQNAGALKYECSEARERPAYQAQARWLELFGKKLEEEFKIDPMTILVRTSCMY
Sequences:
>Translated_154_residues MQDLLTVMAIWLSVNFGLPAIDEKPRIEFVSAARMAEVRRERLAAERSHGVVEIGQGTSPDTGHEFHAIYDDVSRTIYLP SDWTPASSAHVSMLLHEMVHHLQNAGALKYECSEARERPAYQAQARWLELFGKKLEEEFKIDPMTILVRTSCMY >Mature_154_residues MQDLLTVMAIWLSVNFGLPAIDEKPRIEFVSAARMAEVRRERLAAERSHGVVEIGQGTSPDTGHEFHAIYDDVSRTIYLP SDWTPASSAHVSMLLHEMVHHLQNAGALKYECSEARERPAYQAQARWLELFGKKLEEEFKIDPMTILVRTSCMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17546; Mature: 17546
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLLTVMAIWLSVNFGLPAIDEKPRIEFVSAARMAEVRRERLAAERSHGVVEIGQGTSP CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC DTGHEFHAIYDDVSRTIYLPSDWTPASSAHVSMLLHEMVHHLQNAGALKYECSEARERPA CCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCC YQAQARWLELFGKKLEEEFKIDPMTILVRTSCMY HHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCC >Mature Secondary Structure MQDLLTVMAIWLSVNFGLPAIDEKPRIEFVSAARMAEVRRERLAAERSHGVVEIGQGTSP CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC DTGHEFHAIYDDVSRTIYLPSDWTPASSAHVSMLLHEMVHHLQNAGALKYECSEARERPA CCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCCCC YQAQARWLELFGKKLEEEFKIDPMTILVRTSCMY HHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA