| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is sam [H]
Identifier: 110632676
GI number: 110632676
Start: 350572
End: 351531
Strand: Reverse
Name: sam [H]
Synonym: Meso_0315
Alternate gene names: 110632676
Gene position: 351531-350572 (Counterclockwise)
Preceding gene: 110632678
Following gene: 110632675
Centisome position: 7.97
GC content: 59.9
Gene sequence:
>960_bases ATGGAAGAAAGCCTACAACGCTCCCCCCGCAATTCGGAAGACCCCAGCATGACTACCCAATCCAGCACCGGGCCACTGGC GGAACAGCATGACACGACGCGGCTCGGCATCTTCGTCATGCTTGCGGCCATGCTCCTTTTTTCCCTCAATGACGCGTTGG GAAAGTGGCTGGTGGCCACCTATACGGTTGGACAGGTGCTCCTGTTGCGCAGCGTGGTCGCTCTCATCGTGCTTGCACCC TTTCTCTGGAAAGGCGGCTTGCGCCCCCTCATTCAACTGGAGCGGCCGGGGCTACAGTTCCTTCGCGTTCTGTTCGCCGC CGGGGAGGTTTTCAGCTTCTACTTCGCAGTCGCATATCTTCCGCTGGCGGATGTCATGACCTACTGGTTGGCAGCGCCGA TTTACGTGGCAGCGCTTTCGCCTCTGCTCCTGGGAGAGAAGGTGGGCTGGCGGAGATGGACTGCTATTTTCATTGGGTTT GTCGGCGTGGTGGTCGCACTTGATCCCTCGGCAGCCGCCCTTACCCCACCCGCCGTGATCTCAATCCTGGGCAGCTTTGC CTTCGCCTTCATGATGCTTTCATCACGCGCATTGCGCGGCACAGCCGACACGACCCTGGTTTTTTGGCAGATCCTGGCAG CCGGGCTTTTAGGGCTTTTCACCGCGCCATTCGGCTGGGTGACGCCGAGCGGTCTCGATTTTCTCCTGCTCGGACTTCTC GGAGTGATATCGATGCTGGGCCATATGGGCGTCAGCCGCGCCATGAAACTGGCGGACGCCACGGTCGTCGTGCCGTTCGA ATACACGCTGCTGCCCTGGGCAGTGGTGTTCGGCTGGGCCTTTTTCGGCGATATCCCCCGCTCCTCCGTCCTTATCGGCG GATGCATCATTGTGGCGAGTGGCCTGTTCATCTTCTTCCGCGAGCGCAAGATCAAGCCGCCTATCGTGATGGAGCATTAA
Upstream 100 bases:
>100_bases AAGGTGCACCGGATCGAGCTTTTCCGCCGGGCGGCCGGACTGGCCCAAGTGATCCTTCTCGCAGCGCCCTTCTCAGTCCT GCCGGCGACCGTATAGAGGC
Downstream 100 bases:
>100_bases GCCCCTAACCTCTCACATCGTCTATCCAAACCCGATGAGCGGCCGTATCATTGCGACGACCGTTCTGCGCAACCGCTCGA CATTGGAGGATCGTGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MEESLQRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVATYTVGQVLLLRSVVALIVLAP FLWKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAYLPLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGF VGVVVALDPSAAALTPPAVISILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGLLGLFTAPFGWVTPSGLDFLLLGLL GVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIVASGLFIFFRERKIKPPIVMEH
Sequences:
>Translated_319_residues MEESLQRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVATYTVGQVLLLRSVVALIVLAP FLWKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAYLPLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGF VGVVVALDPSAAALTPPAVISILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGLLGLFTAPFGWVTPSGLDFLLLGLL GVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIVASGLFIFFRERKIKPPIVMEH >Mature_319_residues MEESLQRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVATYTVGQVLLLRSVVALIVLAP FLWKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAYLPLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGF VGVVVALDPSAAALTPPAVISILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGLLGLFTAPFGWVTPSGLDFLLLGLL GVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIVASGLFIFFRERKIKPPIVMEH
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 34704; Mature: 34704
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEESLQRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVAT CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTVGQVLLLRSVVALIVLAPFLWKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGFVGVVVALDPSAAALTPPAVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGLLGLFTAPFGWVTPSGLDFLLLGLL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIVAS HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GLFIFFRERKIKPPIVMEH HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MEESLQRSPRNSEDPSMTTQSSTGPLAEQHDTTRLGIFVMLAAMLLFSLNDALGKWLVAT CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTVGQVLLLRSVVALIVLAPFLWKGGLRPLIQLERPGLQFLRVLFAAGEVFSFYFAVAYL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH PLADVMTYWLAAPIYVAALSPLLLGEKVGWRRWTAIFIGFVGVVVALDPSAAALTPPAVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH SILGSFAFAFMMLSSRALRGTADTTLVFWQILAAGLLGLFTAPFGWVTPSGLDFLLLGLL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH GVISMLGHMGVSRAMKLADATVVVPFEYTLLPWAVVFGWAFFGDIPRSSVLIGGCIIVAS HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GLFIFFRERKIKPPIVMEH HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]