Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110632599

Identifier: 110632599

GI number: 110632599

Start: 267998

End: 269866

Strand: Direct

Name: 110632599

Synonym: Meso_0238

Alternate gene names: NA

Gene position: 267998-269866 (Clockwise)

Preceding gene: 110632598

Following gene: 110632600

Centisome position: 6.07

GC content: 61.0

Gene sequence:

>1869_bases
ATGGTGAACCCGATCGCTCAGGCCCTCCAGCCTCTACAGCCTTTCATCTGGGGGCGGGGAGGGGCAAAGCTCACCCCGGA
ACAGATTGCCCGCGAGCGCGAGATTGCCGAAGCTCTGGGCGTGGTCGATACCTCTCCAGTGGATCACTGGCTTCAGGGCG
CGGCGCGTATGGCGAACACGCTCACCGGTCGCATCCGTGAGGGTAGGGCAGACAGAGCCGAGCGGGAAAACCAGGCATTC
AATGAGGACATCGTAAGCAGCCTGTTGGGTAGCGTTGGTGGAACCACCACGCCCGCGCCTACAAGCCCCGCCGCACAGCC
GTTGGACTATGCCTCTCAGCGTGTCTCACAAGCCCATGGCGACATGGGAGCCTACCGGAACGCCATTGCCTCTATTGAGA
GCGCTGGAAGCGGCGATTATCAGGCTGTAGGCCCCGCTCACCCGACGCTTGGCCGCGCCTTGGGCCGCTATCAGGTCATG
GAGGCGAATGTCGGACCCTGGACGGAAAAGCACCTTGGCCGCAGGCTCACGCCTGAGGAATTCCTTGCCAGTCCAGAGGC
GCAGGATGCCGTCTTCGACGGTGAGTTCGGTAGCTATGTTCAGCGTTTCGGAGATCCAGCCATTGCCGCCCAGGCATGGT
TCGCTGGTCCCGGTGGGGTTGGCACAGAGCGGCAGGACTCCCTTGGGACGAGCGTCCCCGAATACGCGCAGAAGTTCACG
ACCGCCCTTGGAAGAACACCAGCGCAGGGTGGTATTCAAGCACAGCTTGAGAGCCTGCCTGTTGGCGGCTCCATGACGAT
GCCGCGTGGCTCCACAAGCCCTGTGGCGGCAGCGCTTGCGATGCAACCTGGCGCGTCTCTCCCGAGAACTGCGACCCCAG
GTTCTATTACGCGCGGTCCTGATGGGCAAACGTATCAGTACGTGGAAACAAGAGGAATGGCCGGGGCGCAGGGTGATTAT
GGGTGGAAACCTGTCAACACCGGTAGTGCACAGACTGCGCAGGCCGGTGGTATCAATCCTGCCATTATCGAGGCCCTTTC
CAGCCCATACGCCAACGAGGGCACGCGCCGAATTGCGGCGTTGTTGCTCGAGCAGCAGATGCAGCCACGCGAGGCACAAC
CGCTCATCAACGCGGGTGACGGCAGGCTTTATGACCCGAATACCGGGCAATGGGTGATAGCTCCGCAAGGTGAGCCGCAA
CTGCCGGAATCTGCACAGACCCTCCAGTGGCGCGCTCAGCAGGCCGGTCTCGTGCCGGGTACGCCTGAGTATAATGAGTT
CATGATTTCGGGTGGTCGCGGCGGTACTTCGCTAAGCATTGGCCCTGACGGCACGGTTCAGTTCTCTCAGGGAAATGCAG
CGCGACCGTTAACTGAAGCTCAGTCGAAGGATGCGGTCTATGCCACAAGGGCAGAGGGCGCGCTTGGGACGCTGGACCAG
TTTGATACAGCACTGACAAGCGCGTCCGAGCGTGTAGCGGAGTATGACCCGACTGGCGTCGTTCGCGGCATGCAATCCGA
GGAGTTCCAAAAAGCTCAACAGGCCGGACTTGAGTTCTTGCAGGCCATTTTGCGCAAGGATACTGGCGCGGCAATAGCAA
AGGAAGAACTGGATCAGTACGGGCGTACATATCTTCCGCAGCCGGGGGACGGCCCTGCTGTTCTAGAGCAAAAACGCATG
GCGCGCAGGCGCGCTCTGGAAGCACTTAAGGCTGGCATGGCTCCGCAGGCTATTCTCAACCAGGAAAAGGCACTGGAGCA
ATCGTCTGTGCAACCCGCGCCAGGTTCAGGCGCAACGGGAGTTCCTGCCGGGGTTGATCCTGCCGATTGGCAATACATGA
CGCCGGAAGAAAGGGCGCTGTTCCAATGA

Upstream 100 bases:

>100_bases
TCAAGGTCTGGCATATCGGCGTCATGGCGCAGGAAGTGCCCGAGGCTCGTGTGTCGGACGAGAGTGGGTTCTTCCGCGTT
GATTACGGGAGGGTCCACTA

Downstream 100 bases:

>100_bases
CGCCAGAGCAGCAGAGAGCGATTGCGATAGCGCGAGCACGCAGGCGTCGAGCCGCAGAACAGTCCGTGCGTCATCCCGAG
TTCGATGGTTCGGACATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF
NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM
EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT
TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY
GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ
LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ
FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM
ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ

Sequences:

>Translated_622_residues
MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF
NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM
EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT
TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY
GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ
LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ
FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM
ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ
>Mature_622_residues
MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANTLTGRIREGRADRAERENQAF
NEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHGDMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVM
EANVGPWTEKHLGRRLTPEEFLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT
TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGPDGQTYQYVETRGMAGAQGDY
GWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAALLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQ
LPESAQTLQWRAQQAGLVPGTPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ
FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQYGRTYLPQPGDGPAVLEQKRM
ARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATGVPAGVDPADWQYMTPEERALFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65720; Mature: 65720

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANT
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LTGRIREGRADRAERENQAFNEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
DMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVMEANVGPWTEKHLGRRLTPEE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHH
FLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT
HHCCCCHHHCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHH
TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGP
HHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
DGQTYQYVETRGMAGAQGDYGWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAA
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
LLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQLPESAQTLQWRAQQAGLVPG
HHHHHHCCCCCCCCCEECCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
TPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ
CCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCHHH
FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQY
HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GRTYLPQPGDGPAVLEQKRMARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VPAGVDPADWQYMTPEERALFQ
CCCCCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MVNPIAQALQPLQPFIWGRGGAKLTPEQIAREREIAEALGVVDTSPVDHWLQGAARMANT
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LTGRIREGRADRAERENQAFNEDIVSSLLGSVGGTTTPAPTSPAAQPLDYASQRVSQAHG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
DMGAYRNAIASIESAGSGDYQAVGPAHPTLGRALGRYQVMEANVGPWTEKHLGRRLTPEE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCCCCHHHHHCCCCCHHH
FLASPEAQDAVFDGEFGSYVQRFGDPAIAAQAWFAGPGGVGTERQDSLGTSVPEYAQKFT
HHCCCCHHHCEECCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHH
TALGRTPAQGGIQAQLESLPVGGSMTMPRGSTSPVAAALAMQPGASLPRTATPGSITRGP
HHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
DGQTYQYVETRGMAGAQGDYGWKPVNTGSAQTAQAGGINPAIIEALSSPYANEGTRRIAA
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
LLLEQQMQPREAQPLINAGDGRLYDPNTGQWVIAPQGEPQLPESAQTLQWRAQQAGLVPG
HHHHHHCCCCCCCCCEECCCCEEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
TPEYNEFMISGGRGGTSLSIGPDGTVQFSQGNAARPLTEAQSKDAVYATRAEGALGTLDQ
CCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCHHHCCCCCEEEECCCCCCCCHHH
FDTALTSASERVAEYDPTGVVRGMQSEEFQKAQQAGLEFLQAILRKDTGAAIAKEELDQY
HHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GRTYLPQPGDGPAVLEQKRMARRRALEALKAGMAPQAILNQEKALEQSSVQPAPGSGATG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
VPAGVDPADWQYMTPEERALFQ
CCCCCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA