Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is 110632594
Identifier: 110632594
GI number: 110632594
Start: 263257
End: 263961
Strand: Direct
Name: 110632594
Synonym: Meso_0233
Alternate gene names: NA
Gene position: 263257-263961 (Clockwise)
Preceding gene: 110632592
Following gene: 110632595
Centisome position: 5.97
GC content: 54.75
Gene sequence:
>705_bases TTGACAATTCTTTCAGCGGCACAAGACGCTATCGCGGAGCTGGTGGGCCGACGCCCTGCGGCTGTGGTCTCTTCGACGGA TGAAATCTGCGTAGAGATTACTGCGTTGGCGAAGAAAGCCGCCGTCGAGATTGCCAAGGCATGCGATTGGCAAGAGCTGA CCGAATTTTATGAAATCACGGCAGACGGGGAGGCGAGCGCGTATCCCTTCCCGTCCGATTATGACCGCATGGTGCAGGCG TCGGAAATCTTCGATCCGAATAACTGGTGCTGGGGGTATCATCACGTCCCCAATTACAGCGAATGGATACTGTACGAAAT CCGCAAGATAGCCATGCTGACGCCTGGCATCTGGACCATTCGCAAGAACCAATTCCACTTCATGCCCACGCCAGCGGCAG GGCAGAAAGCTATCTTTCCCTACATTTCCAAAAACATCTTCCTGTCCCAGAACGAGGCACCCAAGGACACGATCACTAGC GATAGCGATTCCTTTGTTCTGGATGAGCGCCTTCTGACCCTCTCTCTTATCTGGAAATACAAGGCCATGAAGGGCCTCGA TTACCAGCAAGAGGTTGACGACTACAACATAGCGCTCTCGCAGGAGATGACGCGGAACAAGGGCGCTCGCACAATTCGCA AGGGGTGTCGCTTTCGCACCATCGGTGCCTATCCGGCATGGCCGTGGCCGCTTGGTGGAGTATAG
Upstream 100 bases:
>100_bases TAGCCACTGCTGACCTCCTCGAAAGGTTGGCTTGGTTAGAACCCGTCGCAGCGCGCCAACGCTCGGCGGGTTCGCTGTTT GTACCATAGGAGTGCAAACA
Downstream 100 bases:
>100_bases CCCATGCTTCGTCGTGCTGTCCGAGCCGTAGCACCTCCGAAGCAGCGTAAGGCGGAAATCGCCTATTTCACAGCTCCTGT GGCAGGCTGGATAGCTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEITADGEASAYPFPSDYDRMVQA SEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIWTIRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITS DSDSFVLDERLLTLSLIWKYKAMKGLDYQQEVDDYNIALSQEMTRNKGARTIRKGCRFRTIGAYPAWPWPLGGV
Sequences:
>Translated_234_residues MTILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEITADGEASAYPFPSDYDRMVQA SEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIWTIRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITS DSDSFVLDERLLTLSLIWKYKAMKGLDYQQEVDDYNIALSQEMTRNKGARTIRKGCRFRTIGAYPAWPWPLGGV >Mature_233_residues TILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEITADGEASAYPFPSDYDRMVQAS EIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIWTIRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSD SDSFVLDERLLTLSLIWKYKAMKGLDYQQEVDDYNIALSQEMTRNKGARTIRKGCRFRTIGAYPAWPWPLGGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26561; Mature: 26430
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEIT CCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC ADGEASAYPFPSDYDRMVQASEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIWTI CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE RKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSDSDSFVLDERLLTLSLIWKY ECCCEEECCCCCCCCCEECHHHCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH KAMKGLDYQQEVDDYNIALSQEMTRNKGARTIRKGCRFRTIGAYPAWPWPLGGV HHHCCCCHHHHCCCHHEEEHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEIT CCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC ADGEASAYPFPSDYDRMVQASEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIWTI CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE RKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSDSDSFVLDERLLTLSLIWKY ECCCEEECCCCCCCCCEECHHHCCCEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHH KAMKGLDYQQEVDDYNIALSQEMTRNKGARTIRKGCRFRTIGAYPAWPWPLGGV HHHCCCCHHHHCCCHHEEEHHHHHHCCCHHHHHHCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA