Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632595
Identifier: 110632595
GI number: 110632595
Start: 263965
End: 265863
Strand: Direct
Name: 110632595
Synonym: Meso_0234
Alternate gene names: NA
Gene position: 263965-265863 (Clockwise)
Preceding gene: 110632594
Following gene: 110632596
Centisome position: 5.98
GC content: 57.29
Gene sequence:
>1899_bases ATGCTTCGTCGTGCTGTCCGAGCCGTAGCACCTCCGAAGCAGCGTAAGGCGGAAATCGCCTATTTCACAGCTCCTGTGGC AGGCTGGATAGCTAACCGTGCCTTAGCTCAGCCTAATACAGGCCCCCAGGGCGCGGTTGTGCTGGAGAACTTCTTTCCCA CGGCAACGGGCGCAATCCTTCGGCGCGGACGGCAAAAGCACGCCGAATTGCCGACAGAAGTGCGTTCACTGTTCAAATAC GTGGTGGGGAACAACAGGCATCTGTTCGCGTCAACCGTCACCACGATCTATGACGTTACCATTCCGGATTATCCCGAAAA TATCCTGATCGGCCTTGATGACTACAACATCGGTGAGGGTGGTGATGAAATCGGAGAAATCAGCCTCGCTGATGATCATG TTGTGTGGGACGGCGCGACGGGCGGGGACTGGTTCACGGTCCAGTTTGCGACCACTGGTGGTGTCTTTCTCGTTGGAGTG AACGGGCAATCTACCGGCTTCATCTATGACGGACAGGCATTCTATCCGAATGTTGCCGGTGGCGTGTGGACGGTATCCTT TGACGCCGAGACGACTCCGTTTCAGGTGGGTGAGGTTGTTACCGGGGGTACGTCTGGGGCGACCGGCACGGTGATTGAGG TTATCGACGGCGCAAATCCGGGTGAGGGCGGTCTGATCCTTAGCGGTGACGCTGAAGGCTTTCAGAACGACGAATCCCTC ACTGGTAGCCTTGGCGGTGGGGCAACAGCATCGAGCGATGCGCAGAACCTTGTCCCCGGCGTGGAATTCCCAGACGGTCT CACTTCCGCCGATATGGCCTTTGTCTGGGTCTACAAGAATACGTTGTGGTTCGTGCAGAAAGAGAGCCTTACGGCATGGT ATTTGCCGGTCGACCAGATCGGCGGTTTGGCAAAGCGCTTCGATCTGGGCGCTGAGTTCGGTCAAGGCGGTGCTCTGTTG GTCGGGCAATCATGGTCCATGTCGAGTTCCGGGCAGGGCGGCTTATCGGATCAATGCACATTCGTTTCGACTGAAGGCGA AGTTGTTGTCTACCAGGGTTCACACCCTGACGTGTCGGGGGACTGGAGCAAGGTTGGCATTTATCGGATCGGCAAGCCTC TAGGCCGTCGGGCCTTCATCCGTGCGGGGGGCGATCTGGTATTTGCCACGACAATCGGGTTCGTGGCCCTTTCTACGGCC ATTCAGGTCGATGTGGCAGCGCTTTCGCCAAAGGCCGTATCTTTCGCAATCGAAGACGTCTGGAACGAGACCGTCAACAC CCGTAGCGGCGATTGGGTGTGCTGCCTTTGGCCCGCTGGTCAAATGGTGGCAATCGCTCCTCCGGTTGGCGACGATGACA TGCTGTTCTGGGTCTCGAATGCCCGTACAGGTGCTTGGGCACCGTTCACGAATTGGGCGGCGAGCTGCATGGAGGTATTC GAGGGTCGGCTGTACTTCGGCATGGGCGAATTTGTCATGCAAGCGATGGTGGGGGGCACCGACGCAAGCGAACCCTTTGC CGGAACCTACATGCCCTTGTTCTCGGACAACGGTAAGCCTTCTGCGCACAAATACGCGAAGATGGCGAGGGCTGAAATCA TCTCGGCAACGGTGCTGGAGGAAAAGCTTTCGTGTCGTTTCGATTTTGATACGAATCTGCCGCCAGCGCCGAATGTCGCG CCTGTCCCGGTCGGGAACGAATGGGACAATGCCATTTGGGACGAGAGCTTGTGGAGCTCTCCCCGAGACCAGATCGTCAG CAAGCGGCGTCATTCGGTATCCGGCGATGGGTATAGGATTTCGCCAGTCTTGCAGATTTCCTCAGGCGCTGCGGTGCCAT TGGATGCGCAGATCGTCTCGCTCGATTTGCTATACGAGACAGGTGATGTATTTACCTAG
Upstream 100 bases:
>100_bases GACGCGGAACAAGGGCGCTCGCACAATTCGCAAGGGGTGTCGCTTTCGCACCATCGGTGCCTATCCGGCATGGCCGTGGC CGCTTGGTGGAGTATAGCCC
Downstream 100 bases:
>100_bases GGCATTGAATCTAATACAAAAATGGGCTGGTGGTGTTCCCGCACCAACCAGCCCTGACCAAGCCCGAACGTAGGAGGTTC GAGTGGCTAAGACCAATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MLRRAVRAVAPPKQRKAEIAYFTAPVAGWIANRALAQPNTGPQGAVVLENFFPTATGAILRRGRQKHAELPTEVRSLFKY VVGNNRHLFASTVTTIYDVTIPDYPENILIGLDDYNIGEGGDEIGEISLADDHVVWDGATGGDWFTVQFATTGGVFLVGV NGQSTGFIYDGQAFYPNVAGGVWTVSFDAETTPFQVGEVVTGGTSGATGTVIEVIDGANPGEGGLILSGDAEGFQNDESL TGSLGGGATASSDAQNLVPGVEFPDGLTSADMAFVWVYKNTLWFVQKESLTAWYLPVDQIGGLAKRFDLGAEFGQGGALL VGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSGDWSKVGIYRIGKPLGRRAFIRAGGDLVFATTIGFVALSTA IQVDVAALSPKAVSFAIEDVWNETVNTRSGDWVCCLWPAGQMVAIAPPVGDDDMLFWVSNARTGAWAPFTNWAASCMEVF EGRLYFGMGEFVMQAMVGGTDASEPFAGTYMPLFSDNGKPSAHKYAKMARAEIISATVLEEKLSCRFDFDTNLPPAPNVA PVPVGNEWDNAIWDESLWSSPRDQIVSKRRHSVSGDGYRISPVLQISSGAAVPLDAQIVSLDLLYETGDVFT
Sequences:
>Translated_632_residues MLRRAVRAVAPPKQRKAEIAYFTAPVAGWIANRALAQPNTGPQGAVVLENFFPTATGAILRRGRQKHAELPTEVRSLFKY VVGNNRHLFASTVTTIYDVTIPDYPENILIGLDDYNIGEGGDEIGEISLADDHVVWDGATGGDWFTVQFATTGGVFLVGV NGQSTGFIYDGQAFYPNVAGGVWTVSFDAETTPFQVGEVVTGGTSGATGTVIEVIDGANPGEGGLILSGDAEGFQNDESL TGSLGGGATASSDAQNLVPGVEFPDGLTSADMAFVWVYKNTLWFVQKESLTAWYLPVDQIGGLAKRFDLGAEFGQGGALL VGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSGDWSKVGIYRIGKPLGRRAFIRAGGDLVFATTIGFVALSTA IQVDVAALSPKAVSFAIEDVWNETVNTRSGDWVCCLWPAGQMVAIAPPVGDDDMLFWVSNARTGAWAPFTNWAASCMEVF EGRLYFGMGEFVMQAMVGGTDASEPFAGTYMPLFSDNGKPSAHKYAKMARAEIISATVLEEKLSCRFDFDTNLPPAPNVA PVPVGNEWDNAIWDESLWSSPRDQIVSKRRHSVSGDGYRISPVLQISSGAAVPLDAQIVSLDLLYETGDVFT >Mature_632_residues MLRRAVRAVAPPKQRKAEIAYFTAPVAGWIANRALAQPNTGPQGAVVLENFFPTATGAILRRGRQKHAELPTEVRSLFKY VVGNNRHLFASTVTTIYDVTIPDYPENILIGLDDYNIGEGGDEIGEISLADDHVVWDGATGGDWFTVQFATTGGVFLVGV NGQSTGFIYDGQAFYPNVAGGVWTVSFDAETTPFQVGEVVTGGTSGATGTVIEVIDGANPGEGGLILSGDAEGFQNDESL TGSLGGGATASSDAQNLVPGVEFPDGLTSADMAFVWVYKNTLWFVQKESLTAWYLPVDQIGGLAKRFDLGAEFGQGGALL VGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSGDWSKVGIYRIGKPLGRRAFIRAGGDLVFATTIGFVALSTA IQVDVAALSPKAVSFAIEDVWNETVNTRSGDWVCCLWPAGQMVAIAPPVGDDDMLFWVSNARTGAWAPFTNWAASCMEVF EGRLYFGMGEFVMQAMVGGTDASEPFAGTYMPLFSDNGKPSAHKYAKMARAEIISATVLEEKLSCRFDFDTNLPPAPNVA PVPVGNEWDNAIWDESLWSSPRDQIVSKRRHSVSGDGYRISPVLQISSGAAVPLDAQIVSLDLLYETGDVFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67388; Mature: 67388
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRAVRAVAPPKQRKAEIAYFTAPVAGWIANRALAQPNTGPQGAVVLENFFPTATGAIL CCHHHHHHHCCCHHHCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH RRGRQKHAELPTEVRSLFKYVVGNNRHLFASTVTTIYDVTIPDYPENILIGLDDYNIGEG HCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCC GDEIGEISLADDHVVWDGATGGDWFTVQFATTGGVFLVGVNGQSTGFIYDGQAFYPNVAG CCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCEECCCCCC GVWTVSFDAETTPFQVGEVVTGGTSGATGTVIEVIDGANPGEGGLILSGDAEGFQNDESL CEEEEEECCCCCCEECCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCC TGSLGGGATASSDAQNLVPGVEFPDGLTSADMAFVWVYKNTLWFVQKESLTAWYLPVDQI EECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECEEEEEEECCCEEEEEEHHHH GGLAKRFDLGAEFGQGGALLVGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSG CCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCC DWSKVGIYRIGKPLGRRAFIRAGGDLVFATTIGFVALSTAIQVDVAALSPKAVSFAIEDV CCCEEEEEECCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH WNETVNTRSGDWVCCLWPAGQMVAIAPPVGDDDMLFWVSNARTGAWAPFTNWAASCMEVF HHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH EGRLYFGMGEFVMQAMVGGTDASEPFAGTYMPLFSDNGKPSAHKYAKMARAEIISATVLE CCEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH EKLSCRFDFDTNLPPAPNVAPVPVGNEWDNAIWDESLWSSPRDQIVSKRRHSVSGDGYRI HHHCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHCCCCCCCEEE SPVLQISSGAAVPLDAQIVSLDLLYETGDVFT EEEEEECCCCCCCCCCEEEEEEEEEECCCCCC >Mature Secondary Structure MLRRAVRAVAPPKQRKAEIAYFTAPVAGWIANRALAQPNTGPQGAVVLENFFPTATGAIL CCHHHHHHHCCCHHHCCEEEEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH RRGRQKHAELPTEVRSLFKYVVGNNRHLFASTVTTIYDVTIPDYPENILIGLDDYNIGEG HCCCHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEEECCCCCCCEEEEECCCCCCCC GDEIGEISLADDHVVWDGATGGDWFTVQFATTGGVFLVGVNGQSTGFIYDGQAFYPNVAG CCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCEEEEEECCCCCEEEECCCEECCCCCC GVWTVSFDAETTPFQVGEVVTGGTSGATGTVIEVIDGANPGEGGLILSGDAEGFQNDESL CEEEEEECCCCCCEECCCEEECCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCC TGSLGGGATASSDAQNLVPGVEFPDGLTSADMAFVWVYKNTLWFVQKESLTAWYLPVDQI EECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECEEEEEEECCCEEEEEEHHHH GGLAKRFDLGAEFGQGGALLVGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSG CCHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCC DWSKVGIYRIGKPLGRRAFIRAGGDLVFATTIGFVALSTAIQVDVAALSPKAVSFAIEDV CCCEEEEEECCCCCCCEEEEECCCCEEEEHHHHHHHHHHHHEEEEEECCCHHHHHHHHHH WNETVNTRSGDWVCCLWPAGQMVAIAPPVGDDDMLFWVSNARTGAWAPFTNWAASCMEVF HHHHCCCCCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH EGRLYFGMGEFVMQAMVGGTDASEPFAGTYMPLFSDNGKPSAHKYAKMARAEIISATVLE CCEEEECHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH EKLSCRFDFDTNLPPAPNVAPVPVGNEWDNAIWDESLWSSPRDQIVSKRRHSVSGDGYRI HHHCEEEECCCCCCCCCCCCCCCCCCCCCCHHCCHHHHCCHHHHHHHHHHCCCCCCCEEE SPVLQISSGAAVPLDAQIVSLDLLYETGDVFT EEEEEECCCCCCCCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA