Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110632592

Identifier: 110632592

GI number: 110632592

Start: 261857

End: 262582

Strand: Direct

Name: 110632592

Synonym: Meso_0231

Alternate gene names: NA

Gene position: 261857-262582 (Clockwise)

Preceding gene: 110632591

Following gene: 110632594

Centisome position: 5.93

GC content: 58.26

Gene sequence:

>726_bases
ATGGCTCTTTCAGTGCCAATCGATACGCGTGACATCACCATCACGCCCGTTTTCAAGTACATCACCGTCGAGGACGTGCC
CGCTTCGGAGCGCGAAAAGCGCCCAGTCATGAAGACCATCGAAGCCGTTGAGGTGCGCTTTGCCGGTTCCAGGCTCTATT
CCCCGGTCTTCCCCGTCGATGCTATGTGGAAGCGGGAAGGGCACACCATCATCACCTATGCCGAGCGCTGGGCTGACCAG
TACCGCGATTTCCTCGCCGGTAATGATCAGAAGGCGCAGGGCACGCCGCTTGAGATGCTGAAGCCCTACGGCGTCACAGA
TGCTCAGCTTTCCCTCTGCCGTGCACTCAAAATATACTCCATCGAAGCCCTGCACCATCTGGAAGGCCAAAACCTGAAGA
GCCTCCAGATGAACGCCAATCCCCTTAAGGACATGGCGCGCAAGTATATGTCGGATCGCGCCAAGGGCGACACCGCGAGC
GCCGAGATTGCGGCCTTGCGGGCAGAGATCGACCGTCTGAAAACTGCGCAGGCGATTCCGGCGAGTGATCCGAAGCCAGA
CGAGATCGAGGCGGCTATTGAGGCCGCTGACGATGAATATAAGGGTCTCACCGAAGATGATCTGAAAACCAAGATTGCCG
AGATTACCGGCTCGCGGCCCCGTGGCAATCCCTCCCGCACGACACTCGTGCAGTCCCTTCGTGAACTGGAAGGATCGGCT
GTCTAA

Upstream 100 bases:

>100_bases
CCTATAACGCCGCTCCGGCGTAAATAGGCAACATCGGAACCAAGAGGGGCGGCTTACGGGCCGCCCTTTTCCTTTCAAAC
CTCAGACAAAGGAATTCACC

Downstream 100 bases:

>100_bases
TCAGGCAGCCACCCCCAAATTTTCCTTTGCTGTATGCCGGAAATATTGGGGATGCTCACACCATAAATCTGGGCCAGCTG
GCTTTGTGACAAGACCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQ
YRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTAS
AEIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA
V

Sequences:

>Translated_241_residues
MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQ
YRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTAS
AEIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA
V
>Mature_240_residues
ALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQY
RDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASA
EIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26822; Mature: 26691

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVD
CEEECCCCCCCEEEEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCH
AMWKREGHTIITYAERWADQYRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYS
HHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH
IEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASAEIAALRAEIDRLKTAQAIP
HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
ASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA
CCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
V
C
>Mature Secondary Structure 
ALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVD
EEECCCCCCCEEEEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCH
AMWKREGHTIITYAERWADQYRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYS
HHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH
IEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASAEIAALRAEIDRLKTAQAIP
HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
ASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA
CCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA