Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632592
Identifier: 110632592
GI number: 110632592
Start: 261857
End: 262582
Strand: Direct
Name: 110632592
Synonym: Meso_0231
Alternate gene names: NA
Gene position: 261857-262582 (Clockwise)
Preceding gene: 110632591
Following gene: 110632594
Centisome position: 5.93
GC content: 58.26
Gene sequence:
>726_bases ATGGCTCTTTCAGTGCCAATCGATACGCGTGACATCACCATCACGCCCGTTTTCAAGTACATCACCGTCGAGGACGTGCC CGCTTCGGAGCGCGAAAAGCGCCCAGTCATGAAGACCATCGAAGCCGTTGAGGTGCGCTTTGCCGGTTCCAGGCTCTATT CCCCGGTCTTCCCCGTCGATGCTATGTGGAAGCGGGAAGGGCACACCATCATCACCTATGCCGAGCGCTGGGCTGACCAG TACCGCGATTTCCTCGCCGGTAATGATCAGAAGGCGCAGGGCACGCCGCTTGAGATGCTGAAGCCCTACGGCGTCACAGA TGCTCAGCTTTCCCTCTGCCGTGCACTCAAAATATACTCCATCGAAGCCCTGCACCATCTGGAAGGCCAAAACCTGAAGA GCCTCCAGATGAACGCCAATCCCCTTAAGGACATGGCGCGCAAGTATATGTCGGATCGCGCCAAGGGCGACACCGCGAGC GCCGAGATTGCGGCCTTGCGGGCAGAGATCGACCGTCTGAAAACTGCGCAGGCGATTCCGGCGAGTGATCCGAAGCCAGA CGAGATCGAGGCGGCTATTGAGGCCGCTGACGATGAATATAAGGGTCTCACCGAAGATGATCTGAAAACCAAGATTGCCG AGATTACCGGCTCGCGGCCCCGTGGCAATCCCTCCCGCACGACACTCGTGCAGTCCCTTCGTGAACTGGAAGGATCGGCT GTCTAA
Upstream 100 bases:
>100_bases CCTATAACGCCGCTCCGGCGTAAATAGGCAACATCGGAACCAAGAGGGGCGGCTTACGGGCCGCCCTTTTCCTTTCAAAC CTCAGACAAAGGAATTCACC
Downstream 100 bases:
>100_bases TCAGGCAGCCACCCCCAAATTTTCCTTTGCTGTATGCCGGAAATATTGGGGATGCTCACACCATAAATCTGGGCCAGCTG GCTTTGTGACAAGACCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQ YRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTAS AEIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA V
Sequences:
>Translated_241_residues MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQ YRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTAS AEIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA V >Mature_240_residues ALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVDAMWKREGHTIITYAERWADQY RDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYSIEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASA EIAALRAEIDRLKTAQAIPASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26822; Mature: 26691
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVD CEEECCCCCCCEEEEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCH AMWKREGHTIITYAERWADQYRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYS HHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH IEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASAEIAALRAEIDRLKTAQAIP HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC ASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA CCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC V C >Mature Secondary Structure ALSVPIDTRDITITPVFKYITVEDVPASEREKRPVMKTIEAVEVRFAGSRLYSPVFPVD EEECCCCCCCEEEEEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCHHHCCCCCCCH AMWKREGHTIITYAERWADQYRDFLAGNDQKAQGTPLEMLKPYGVTDAQLSLCRALKIYS HHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHH IEALHHLEGQNLKSLQMNANPLKDMARKYMSDRAKGDTASAEIAALRAEIDRLKTAQAIP HHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC ASDPKPDEIEAAIEAADDEYKGLTEDDLKTKIAEITGSRPRGNPSRTTLVQSLRELEGSA CCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA