Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947692

Identifier: 109947692

GI number: 109947692

Start: 1008747

End: 1009226

Strand: Reverse

Name: 109947692

Synonym: Hac_1162

Alternate gene names: NA

Gene position: 1009226-1008747 (Counterclockwise)

Preceding gene: 109947693

Following gene: 109947691

Centisome position: 64.95

GC content: 36.67

Gene sequence:

>480_bases
TTGGAATTGGATTTAGTGCTTATCTCTTTAGGCGAGGGGGTTTTGCTTGGGGTGTATCAAGAGAATTTTTTACAAACTTC
TTACACTTCCAAAGCAAAAACAAGCGAAGCTTTAGTGGAAGTTTTTTCGCAATTATTCAAAGATTTTAAGAACCTTTATC
CTACTTCACCAATGGTTAAAGGGGTTTATTACGCTAAAGGGCCAGGGAGTTTCACGAGCCTAAAACTCACGCACATTTTC
CTACACACTCTATCTTCAATTTATGACTTTGAACTTTATTCAACCACAGGCTTTGATTTTAACGACAACACGCCCATTTT
AGCGTATGCCAATAAATACTTTGTTTCAAAAGAAATGGAGAGCTTGAGGGATTTTAAGGATTTAAAGGTTTTGCCCAAAG
ATTTCATGCTACCCCCTTATTTAGAAAAAGATAAATTCACCCAATCCAACACGCCGTTTTACATTTTACCTCCTATTTAG

Upstream 100 bases:

>100_bases
AGCAGACGCTAAAAATTATGAAGTTTTAGTGGCCCTAGATCCAGTTAAAGAACTTGCGTTGCAAAAGGCTTTCGCTTAAT
TTTAAACTAGGGTTTATTTT

Downstream 100 bases:

>100_bases
TGTATAATACGGACTTAAAAAAAGAATAGGGTATCAAAAATAGGGGTTTAGAATTTGGTAGTGAGTGTTCCTGCAACAAG
TGCGAATTTAGGCCCCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF
LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI

Sequences:

>Translated_159_residues
MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF
LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI
>Mature_159_residues
MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF
LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18237; Mature: 18237

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVK
CCCEEEEEECCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
GVYYAKGPGSFTSLKLTHIFLHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEME
CEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCHHHHHHHHH
SLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI
HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVK
CCCEEEEEECCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC
GVYYAKGPGSFTSLKLTHIFLHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEME
CEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCHHHHHHHHH
SLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI
HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA