| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947692
Identifier: 109947692
GI number: 109947692
Start: 1008747
End: 1009226
Strand: Reverse
Name: 109947692
Synonym: Hac_1162
Alternate gene names: NA
Gene position: 1009226-1008747 (Counterclockwise)
Preceding gene: 109947693
Following gene: 109947691
Centisome position: 64.95
GC content: 36.67
Gene sequence:
>480_bases TTGGAATTGGATTTAGTGCTTATCTCTTTAGGCGAGGGGGTTTTGCTTGGGGTGTATCAAGAGAATTTTTTACAAACTTC TTACACTTCCAAAGCAAAAACAAGCGAAGCTTTAGTGGAAGTTTTTTCGCAATTATTCAAAGATTTTAAGAACCTTTATC CTACTTCACCAATGGTTAAAGGGGTTTATTACGCTAAAGGGCCAGGGAGTTTCACGAGCCTAAAACTCACGCACATTTTC CTACACACTCTATCTTCAATTTATGACTTTGAACTTTATTCAACCACAGGCTTTGATTTTAACGACAACACGCCCATTTT AGCGTATGCCAATAAATACTTTGTTTCAAAAGAAATGGAGAGCTTGAGGGATTTTAAGGATTTAAAGGTTTTGCCCAAAG ATTTCATGCTACCCCCTTATTTAGAAAAAGATAAATTCACCCAATCCAACACGCCGTTTTACATTTTACCTCCTATTTAG
Upstream 100 bases:
>100_bases AGCAGACGCTAAAAATTATGAAGTTTTAGTGGCCCTAGATCCAGTTAAAGAACTTGCGTTGCAAAAGGCTTTCGCTTAAT TTTAAACTAGGGTTTATTTT
Downstream 100 bases:
>100_bases TGTATAATACGGACTTAAAAAAAGAATAGGGTATCAAAAATAGGGGTTTAGAATTTGGTAGTGAGTGTTCCTGCAACAAG TGCGAATTTAGGCCCCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI
Sequences:
>Translated_159_residues MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI >Mature_159_residues MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVKGVYYAKGPGSFTSLKLTHIF LHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEMESLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18237; Mature: 18237
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVK CCCEEEEEECCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC GVYYAKGPGSFTSLKLTHIFLHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEME CEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCHHHHHHHHH SLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MELDLVLISLGEGVLLGVYQENFLQTSYTSKAKTSEALVEVFSQLFKDFKNLYPTSPMVK CCCEEEEEECCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC GVYYAKGPGSFTSLKLTHIFLHTLSSIYDFELYSTTGFDFNDNTPILAYANKYFVSKEME CEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCHHHHHHHHH SLRDFKDLKVLPKDFMLPPYLEKDKFTQSNTPFYILPPI HHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA