Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947664

Identifier: 109947664

GI number: 109947664

Start: 983447

End: 983953

Strand: Reverse

Name: 109947664

Synonym: Hac_1132

Alternate gene names: NA

Gene position: 983953-983447 (Counterclockwise)

Preceding gene: 109947665

Following gene: 109947659

Centisome position: 63.32

GC content: 38.66

Gene sequence:

>507_bases
ATGATCACAACAAGCGTTATTTTAATATTAATTTTTTTGTGTGGTTTTTTAGGGGCTGTGGAATTGCCTGGCGTGTATCA
AACCCAACCTTTTTTGTCCATAAAAAGCTCTTTTGTGGAGTTTTTTGAGCATGATGGGAAGTTTTACGCTTATGGTATTT
CTAATGCAGATGGCTCTAGTGCTAAAAAAGATGAGCATAACCCTAACCCACAATTAAGGGATCGCAGTGATAAAGGCGTG
GTGTTTTTAAGCGGTTTGACTAAAAAAGGGGAAAGGCTTTACAAGGGCGGTAAGGTGTATAATTTTTATGACGGCAGAAC
TTACTATGTGAAAGTCACTCAAAATCCCAATGGGGATTTAGAATTTACCCCAAGCTATGACAAATGGGGGTATGTGGGCA
AGACTTTCACTTGGAAACGCCTGAGTAATGAAGAAATCAAAAACCTAAAACTCAAGCGTTACAATTTGAATAAAGTCCTT
AAGACCCTTCAGAATAGCCCTAGCTAG

Upstream 100 bases:

>100_bases
ATGCGTTGAGGTTTTATGGAGAGTCTTTTGAAAAGTATAGGACAGAGCCGATTTTTAAAGCGGTCGTTAAAGTGCCTAAA
GAGCTCATCTCATTTGCACT

Downstream 100 bases:

>100_bases
AGAAAGTTTTTAATCTTTTTTCTCTTGGCATTCTTCACACCACACAAACAATTTCATGTCATGGCTAATCAGCTTGGCTT
GGTATTTTTTAGCGACTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MITTSVILILIFLCGFLGAVELPGVYQTQPFLSIKSSFVEFFEHDGKFYAYGISNADGSSAKKDEHNPNPQLRDRSDKGV
VFLSGLTKKGERLYKGGKVYNFYDGRTYYVKVTQNPNGDLEFTPSYDKWGYVGKTFTWKRLSNEEIKNLKLKRYNLNKVL
KTLQNSPS

Sequences:

>Translated_168_residues
MITTSVILILIFLCGFLGAVELPGVYQTQPFLSIKSSFVEFFEHDGKFYAYGISNADGSSAKKDEHNPNPQLRDRSDKGV
VFLSGLTKKGERLYKGGKVYNFYDGRTYYVKVTQNPNGDLEFTPSYDKWGYVGKTFTWKRLSNEEIKNLKLKRYNLNKVL
KTLQNSPS
>Mature_168_residues
MITTSVILILIFLCGFLGAVELPGVYQTQPFLSIKSSFVEFFEHDGKFYAYGISNADGSSAKKDEHNPNPQLRDRSDKGV
VFLSGLTKKGERLYKGGKVYNFYDGRTYYVKVTQNPNGDLEFTPSYDKWGYVGKTFTWKRLSNEEIKNLKLKRYNLNKVL
KTLQNSPS

Specific function: Unknown

COG id: COG4731

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19176; Mature: 19176

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTSVILILIFLCGFLGAVELPGVYQTQPFLSIKSSFVEFFEHDGKFYAYGISNADGSS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
AKKDEHNPNPQLRDRSDKGVVFLSGLTKKGERLYKGGKVYNFYDGRTYYVKVTQNPNGDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCEEEEEEEEECCCCCE
EFTPSYDKWGYVGKTFTWKRLSNEEIKNLKLKRYNLNKVLKTLQNSPS
EECCCCCCCCCCCCCEEEECCCCHHHHCEEEEEECHHHHHHHHHCCCC
>Mature Secondary Structure
MITTSVILILIFLCGFLGAVELPGVYQTQPFLSIKSSFVEFFEHDGKFYAYGISNADGSS
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
AKKDEHNPNPQLRDRSDKGVVFLSGLTKKGERLYKGGKVYNFYDGRTYYVKVTQNPNGDL
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCEEEEECCEEEEEEEEECCCCCE
EFTPSYDKWGYVGKTFTWKRLSNEEIKNLKLKRYNLNKVLKTLQNSPS
EECCCCCCCCCCCCCEEEECCCCHHHHCEEEEEECHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA