| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947665
Identifier: 109947665
GI number: 109947665
Start: 983950
End: 984486
Strand: Reverse
Name: 109947665
Synonym: Hac_1133
Alternate gene names: NA
Gene position: 984486-983950 (Counterclockwise)
Preceding gene: 109947666
Following gene: 109947664
Centisome position: 63.35
GC content: 39.66
Gene sequence:
>537_bases ATGGCCATTTTTGGGGAATTAAGCTCGCTTGGGCATTCGTTTAAAAAAACGCAAGAATCAGAAATTTTGCGTGCGTATTT ACACGATGTCATGCAAAAAGATAGCAAAGCTTATCAAAGGGTTTTAAATCTCGCTCCTAATACAGAATTTCAAGTGCCTT TAGAGCATGGTATGTTTAGCATAGAGCAGAGCTATTGCTTAGAGCATGTTAGAGAGAGCGAGAAAGGCTTTTTTGAAAGC CACCGGCAGTATGTGGATTTCCAATTGGTTGTTAAGGGCATTGAAGGGGCTAAAGTGGTAGATATAAAAAAGGCTACCAT GAAAACCCCTTATGATGGAAAAAAGGATTTGATCGTTTATGAGCCGGTCAAAGAGGCTTCTTTTTTGCATTTGAATGCAA GCATGTTGGCTGTCTTTTTTGAAAGCGATGTGCATGCGTTGAGGTTTTATGGAGAGTCTTTTGAAAAGTATAGGACAGAG CCGATTTTTAAAGCGGTCGTTAAAGTGCCTAAAGAGCTCATCTCATTTGCACTATGA
Upstream 100 bases:
>100_bases ATGGGAATTTTGGCATTCAAATCACAGATATTGGGACTAAAAAGGAACGATTAGAGCAACTGAAAAATTAAACCATTTTA GAGTAAAAAAGGAAGGAATT
Downstream 100 bases:
>100_bases TCACAACAAGCGTTATTTTAATATTAATTTTTTTGTGTGGTTTTTTAGGGGCTGTGGAATTGCCTGGCGTGTATCAAACC CAACCTTTTTTGTCCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAIFGELSSLGHSFKKTQESEILRAYLHDVMQKDSKAYQRVLNLAPNTEFQVPLEHGMFSIEQSYCLEHVRESEKGFFES HRQYVDFQLVVKGIEGAKVVDIKKATMKTPYDGKKDLIVYEPVKEASFLHLNASMLAVFFESDVHALRFYGESFEKYRTE PIFKAVVKVPKELISFAL
Sequences:
>Translated_178_residues MAIFGELSSLGHSFKKTQESEILRAYLHDVMQKDSKAYQRVLNLAPNTEFQVPLEHGMFSIEQSYCLEHVRESEKGFFES HRQYVDFQLVVKGIEGAKVVDIKKATMKTPYDGKKDLIVYEPVKEASFLHLNASMLAVFFESDVHALRFYGESFEKYRTE PIFKAVVKVPKELISFAL >Mature_177_residues AIFGELSSLGHSFKKTQESEILRAYLHDVMQKDSKAYQRVLNLAPNTEFQVPLEHGMFSIEQSYCLEHVRESEKGFFESH RQYVDFQLVVKGIEGAKVVDIKKATMKTPYDGKKDLIVYEPVKEASFLHLNASMLAVFFESDVHALRFYGESFEKYRTEP IFKAVVKVPKELISFAL
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20507; Mature: 20376
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIFGELSSLGHSFKKTQESEILRAYLHDVMQKDSKAYQRVLNLAPNTEFQVPLEHGMFS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCHHH IEQSYCLEHVRESEKGFFESHRQYVDFQLVVKGIEGAKVVDIKKATMKTPYDGKKDLIVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHCCCCCCCCCCEEEE EPVKEASFLHLNASMLAVFFESDVHALRFYGESFEKYRTEPIFKAVVKVPKELISFAL CCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AIFGELSSLGHSFKKTQESEILRAYLHDVMQKDSKAYQRVLNLAPNTEFQVPLEHGMFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCHHH IEQSYCLEHVRESEKGFFESHRQYVDFQLVVKGIEGAKVVDIKKATMKTPYDGKKDLIVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHCCCCCCCCCCEEEE EPVKEASFLHLNASMLAVFFESDVHALRFYGESFEKYRTEPIFKAVVKVPKELISFAL CCCCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA