Click here to switch to the map view.

The map label for this gene is 109947659

Identifier: 109947659

GI number: 109947659

Start: 978990

End: 980240

Strand: Reverse

Name: 109947659

Synonym: Hac_1127

Alternate gene names: NA

Gene position: 980240-978990 (Counterclockwise)

Preceding gene: 109947664

Following gene: 109947627

Centisome position: 63.08

GC content: 39.25

Gene sequence:

>1251_bases
ATGCAAGATAAGAAAAATAAGAAAAGATATTATCATTTGGCGTTATGGATCCTTTTTTTAAATGGTCTGTCTTTGAAAGC
TTTAGAGATTGCAGTCAAACCTTTTGGCTATCTGGGGCTATTGTATAATCAAGGGGCACAAAAAAATCCCCATAGCTATG
TGGGGGCACTAGCGCGCCTTGGAGCGGATTTTTCTTATAGTAATGGGTGGTCGTTGGGTATTGGGGCTATTGGGGCTTGG
AATGCTTATAATAAACAGCGTTTGGCTGATCTTTACATTAGTCTAGGGAATTTTTTTGGCAACCCTAACAATGTGAAACC
TTACTTGAGCGCTGGCGATATTTCAGACGCGTATCTCCAATACACTAACCAGCGTTTTAAAATAGCTTTAGGGCGTTTCA
ATACCGATTTTGTGGATTTTGATTGGATAGGGGGCAATATTCAAGGGGTCTCTGCGGCTTTTAAGCAAAATTCCATGCGT
TATTTTGGGATTTTTATGGACAGCATGCTTTATAATGGGCATCAAATCAATAAAGAGCAAGGAAATCGGATCGCTACTTC
CCTAAACGCTCTAGCGTCGTATGATCCTGTGTCTAAACGCTTGTATGTTGGGGGGGAAGTGTTTGTTTTGGGTGCAGAAT
ACAAAAATAAAAATTTAACATTCACTCCTTTTATTTTAACAAACACTCGCTTACCGCTGCCCACTCAAAATGTTTTAGTC
CAAGTGGGAGGTAAGTTTGAGTATGATGCTTCTCTAGCTAAGGGTTTCACTTCGCACACTCTAATGCATGGCATGTATCA
ATACGGCAACACTGACGCTGTTACGAGCGCTAAAAATGCCGGCTTGTTTTTGATCGATCAAACTTTTGAATACAAAATTT
TTAATTTTGGAATGGGTTTTTATATTGTTCCGGCAAGAAACAATAAGGGCTATTTATGGACTTTTAACGATAGGACTAAA
TTCTATGGTCGTGGGATCAATGCACCTGGTGTGCCGGCGATTTATTTTGCTAACTCCAGCATTTCAGGCTATGTTTTTGG
TGGGCTTAAAACTAAAAGGGTTCGTTTAGATGCGATGGTGGCTTTTGGGGATTATCAAGAATATTCTTTAATGAGTAGTT
TTAGGATTTGGGCTTATAGGAGTTTGTCTTTTGATATGGGTGGGGGGTATGTGTATGCTTATAATTCCAAAGCCACGAGA
AAAAGTCTTGGAAATAGCTCTTTTGTCTTTTTTGGGAAGTTTTTGTTTTAA

Upstream 100 bases:

>100_bases
TTGATAATGTTTAGTGGTGATTAAGATTTTAAATCCGTTTCAGCACAATTAAAAGGATTTTTCATTAAAATATTAGGTTT
AAATCCACGATGAGTTTTTA

Downstream 100 bases:

>100_bases
AATTTAACTTTGATTCGTTGATTTTTAAATATAAAATTTAAAAAATCTCAAAGTATTTTTTTAAGATTAAATAAGAGAAA
GCTTGCGAAAAAGCGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MQDKKNKKRYYHLALWILFLNGLSLKALEIAVKPFGYLGLLYNQGAQKNPHSYVGALARLGADFSYSNGWSLGIGAIGAW
NAYNKQRLADLYISLGNFFGNPNNVKPYLSAGDISDAYLQYTNQRFKIALGRFNTDFVDFDWIGGNIQGVSAAFKQNSMR
YFGIFMDSMLYNGHQINKEQGNRIATSLNALASYDPVSKRLYVGGEVFVLGAEYKNKNLTFTPFILTNTRLPLPTQNVLV
QVGGKFEYDASLAKGFTSHTLMHGMYQYGNTDAVTSAKNAGLFLIDQTFEYKIFNFGMGFYIVPARNNKGYLWTFNDRTK
FYGRGINAPGVPAIYFANSSISGYVFGGLKTKRVRLDAMVAFGDYQEYSLMSSFRIWAYRSLSFDMGGGYVYAYNSKATR
KSLGNSSFVFFGKFLF

Sequences:

>Translated_416_residues
MQDKKNKKRYYHLALWILFLNGLSLKALEIAVKPFGYLGLLYNQGAQKNPHSYVGALARLGADFSYSNGWSLGIGAIGAW
NAYNKQRLADLYISLGNFFGNPNNVKPYLSAGDISDAYLQYTNQRFKIALGRFNTDFVDFDWIGGNIQGVSAAFKQNSMR
YFGIFMDSMLYNGHQINKEQGNRIATSLNALASYDPVSKRLYVGGEVFVLGAEYKNKNLTFTPFILTNTRLPLPTQNVLV
QVGGKFEYDASLAKGFTSHTLMHGMYQYGNTDAVTSAKNAGLFLIDQTFEYKIFNFGMGFYIVPARNNKGYLWTFNDRTK
FYGRGINAPGVPAIYFANSSISGYVFGGLKTKRVRLDAMVAFGDYQEYSLMSSFRIWAYRSLSFDMGGGYVYAYNSKATR
KSLGNSSFVFFGKFLF
>Mature_416_residues
MQDKKNKKRYYHLALWILFLNGLSLKALEIAVKPFGYLGLLYNQGAQKNPHSYVGALARLGADFSYSNGWSLGIGAIGAW
NAYNKQRLADLYISLGNFFGNPNNVKPYLSAGDISDAYLQYTNQRFKIALGRFNTDFVDFDWIGGNIQGVSAAFKQNSMR
YFGIFMDSMLYNGHQINKEQGNRIATSLNALASYDPVSKRLYVGGEVFVLGAEYKNKNLTFTPFILTNTRLPLPTQNVLV
QVGGKFEYDASLAKGFTSHTLMHGMYQYGNTDAVTSAKNAGLFLIDQTFEYKIFNFGMGFYIVPARNNKGYLWTFNDRTK
FYGRGINAPGVPAIYFANSSISGYVFGGLKTKRVRLDAMVAFGDYQEYSLMSSFRIWAYRSLSFDMGGGYVYAYNSKATR
KSLGNSSFVFFGKFLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46743; Mature: 46743

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKKNKKRYYHLALWILFLNGLSLKALEIAVKPFGYLGLLYNQGAQKNPHSYVGALARL
CCCCCCCCHHHHHHEEHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHH
GADFSYSNGWSLGIGAIGAWNAYNKQRLADLYISLGNFFGNPNNVKPYLSAGDISDAYLQ
CCCCCCCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHH
YTNQRFKIALGRFNTDFVDFDWIGGNIQGVSAAFKQNSMRYFGIFMDSMLYNGHQINKEQ
HCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEHHHHHCCCEEECHHC
GNRIATSLNALASYDPVSKRLYVGGEVFVLGAEYKNKNLTFTPFILTNTRLPLPTQNVLV
CCCHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEE
QVGGKFEYDASLAKGFTSHTLMHGMYQYGNTDAVTSAKNAGLFLIDQTFEYKIFNFGMGF
EECCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCE
YIVPARNNKGYLWTFNDRTKFYGRGINAPGVPAIYFANSSISGYVFGGLKTKRVRLDAMV
EEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCEEEEECEEEEEEEEEEEE
AFGDYQEYSLMSSFRIWAYRSLSFDMGGGYVYAYNSKATRKSLGNSSFVFFGKFLF
EECCCHHHHHHHHEEEEEEEEEEEECCCCEEEEECCCHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MQDKKNKKRYYHLALWILFLNGLSLKALEIAVKPFGYLGLLYNQGAQKNPHSYVGALARL
CCCCCCCCHHHHHHEEHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHH
GADFSYSNGWSLGIGAIGAWNAYNKQRLADLYISLGNFFGNPNNVKPYLSAGDISDAYLQ
CCCCCCCCCCEECCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHH
YTNQRFKIALGRFNTDFVDFDWIGGNIQGVSAAFKQNSMRYFGIFMDSMLYNGHQINKEQ
HCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEHHHHHCCCEEECHHC
GNRIATSLNALASYDPVSKRLYVGGEVFVLGAEYKNKNLTFTPFILTNTRLPLPTQNVLV
CCCHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCEEE
QVGGKFEYDASLAKGFTSHTLMHGMYQYGNTDAVTSAKNAGLFLIDQTFEYKIFNFGMGF
EECCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCE
YIVPARNNKGYLWTFNDRTKFYGRGINAPGVPAIYFANSSISGYVFGGLKTKRVRLDAMV
EEEEEECCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCEEEEECEEEEEEEEEEEE
AFGDYQEYSLMSSFRIWAYRSLSFDMGGGYVYAYNSKATRKSLGNSSFVFFGKFLF
EECCCHHHHHHHHEEEEEEEEEEEECCCCEEEEECCCHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA