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The map label for this gene is omp16

Identifier: 109947627

GI number: 109947627

Start: 945421

End: 946524

Strand: Reverse

Name: omp16

Synonym: Hac_1092

Alternate gene names: NA

Gene position: 946524-945421 (Counterclockwise)

Preceding gene: 109947659

Following gene: 109947625

Centisome position: 60.91

GC content: 37.23

Gene sequence:

>1104_bases
ATGCAAAAAATCGTATTCTCTCTGTCTTTATTCTCATCTTTATCTTTATTCTCTTTTTGTAGCGCTGAAGAAAATGGGGC
GTATGCGAGCGTGGGGTTTGAATATTCTATGAGCTATGCCATCCAACACAACAACCCCTTTTTAAATCAAGAACGCATTA
AAATCATTTCCAACGCTTACAATCAAATCAATGGACTCAATCAAGTTGCAAATCAAGTCAAAAACATGCCCAAAACCTTT
GAATATATCAATAACAATCTAAAAAACAACCCTAAACCAAGCGCTACTGCAATGCAAGCTGAAGCTTACTACCTCCAATC
CACGCTTAAGAACATTGAAAAAATAGTGATGGTTAGCCATAGCGCTCCATCCAACCCTAAATTAGTCCAAGCGTTAGAAG
AAATGCAAAAACCCACTGCCGATCCTTTAGAATTAGTCACAAACTTAAAAAATTTAGAATTGCAATTCAACCACTCTCAA
AACAACATCCTTGCTTCGCTTTCTTCTCAAACCGCTCGCCTTTCAAATTCTTTAAACTCGCTTGATCCTAGTGCTCATTC
TAAAAACATTTCAAACATGTATGGGGTAACTTTGAGCGTGGGATACAAGCATTTTTTTACCAAAAAGAGGAATCAAGGGT
TTCGCTATTACTTGTTTTATGACTATGGCTACACTCATTTCAGTTTTGCGGGTAATGGCATTGGTTTAGGGAAAATGAAC
AACCATCTCTATGGGCTTGGAGTGGATTATCTTTTTAATTTCATTGACAATGCGCAAAAACATTCTAGCGTGGGTTTTTA
TGTGGGCTTTGCTTTAGCGGGGAGTTCTTGGGTGGGGAGTGGTTTGAGTCTGTGGATAAGCCAAATGGATTTTATCAACA
ATTATTTGACCAACTATCAAGCTGAAATGCACACCAGTTTTTTTCAAATCCCTTTGAATTTTGGATTTCGTGTGAATGTG
GATAGGCATAATGGCTTTGAAATGGGCTTAAAGATCCCTTTAGCGATCAATTCTTTTTATGAAACGCATGGCAAAGGGTT
AAACACTTCCCTCTTTTTTAAACGCCTTGTCATGTTTAATGTAAGTTATGTTTATAGTTTTTAG

Upstream 100 bases:

>100_bases
AAATGTTCTTATTGTATTCAAAAATGGCTTAAAAATTGTTTCACCCACTTTTCTATTAAAATTAGTGTATTATTGAAAAT
ATTTTTGATTAGGATCAACC

Downstream 100 bases:

>100_bases
GGGGAAACAAGCACCCCTTAAATGTTGGCATACCGCAGCCTTTAAGCCTTAAAGACTCTTTAGTTTTTTTGTCTCAAATG
ATGAACGCTCTCGCCCCCAA

Product: outer membrane protein 16

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein HopD; Outer Membrane Protein Adhesin; Outer Membrane Function; Outer Membrane Protein HopL; Outer Membrane Protein,HopV BabB BabA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MQKIVFSLSLFSSLSLFSFCSAEENGAYASVGFEYSMSYAIQHNNPFLNQERIKIISNAYNQINGLNQVANQVKNMPKTF
EYINNNLKNNPKPSATAMQAEAYYLQSTLKNIEKIVMVSHSAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQFNHSQ
NNILASLSSQTARLSNSLNSLDPSAHSKNISNMYGVTLSVGYKHFFTKKRNQGFRYYLFYDYGYTHFSFAGNGIGLGKMN
NHLYGLGVDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLSLWISQMDFINNYLTNYQAEMHTSFFQIPLNFGFRVNV
DRHNGFEMGLKIPLAINSFYETHGKGLNTSLFFKRLVMFNVSYVYSF

Sequences:

>Translated_367_residues
MQKIVFSLSLFSSLSLFSFCSAEENGAYASVGFEYSMSYAIQHNNPFLNQERIKIISNAYNQINGLNQVANQVKNMPKTF
EYINNNLKNNPKPSATAMQAEAYYLQSTLKNIEKIVMVSHSAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQFNHSQ
NNILASLSSQTARLSNSLNSLDPSAHSKNISNMYGVTLSVGYKHFFTKKRNQGFRYYLFYDYGYTHFSFAGNGIGLGKMN
NHLYGLGVDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLSLWISQMDFINNYLTNYQAEMHTSFFQIPLNFGFRVNV
DRHNGFEMGLKIPLAINSFYETHGKGLNTSLFFKRLVMFNVSYVYSF
>Mature_367_residues
MQKIVFSLSLFSSLSLFSFCSAEENGAYASVGFEYSMSYAIQHNNPFLNQERIKIISNAYNQINGLNQVANQVKNMPKTF
EYINNNLKNNPKPSATAMQAEAYYLQSTLKNIEKIVMVSHSAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQFNHSQ
NNILASLSSQTARLSNSLNSLDPSAHSKNISNMYGVTLSVGYKHFFTKKRNQGFRYYLFYDYGYTHFSFAGNGIGLGKMN
NHLYGLGVDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLSLWISQMDFINNYLTNYQAEMHTSFFQIPLNFGFRVNV
DRHNGFEMGLKIPLAINSFYETHGKGLNTSLFFKRLVMFNVSYVYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41539; Mature: 41539

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIVFSLSLFSSLSLFSFCSAEENGAYASVGFEYSMSYAIQHNNPFLNQERIKIISNAY
CCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH
NQINGLNQVANQVKNMPKTFEYINNNLKNNPKPSATAMQAEAYYLQSTLKNIEKIVMVSH
HHHCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC
SAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQFNHSQNNILASLSSQTARLSNSLNS
CCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHH
LDPSAHSKNISNMYGVTLSVGYKHFFTKKRNQGFRYYLFYDYGYTHFSFAGNGIGLGKMN
CCCCCCCCCCCHHEEEEEEECHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCEEECCCC
NHLYGLGVDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLSLWISQMDFINNYLTNYQ
CCEEECCHHHHHHHHHCHHHCCCCEEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHCCH
AEMHTSFFQIPLNFGFRVNVDRHNGFEMGLKIPLAINSFYETHGKGLNTSLFFKRLVMFN
HHHCCEEEEEEECCCEEEEEECCCCEEECEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHH
VSYVYSF
HHHEEEC
>Mature Secondary Structure
MQKIVFSLSLFSSLSLFSFCSAEENGAYASVGFEYSMSYAIQHNNPFLNQERIKIISNAY
CCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHH
NQINGLNQVANQVKNMPKTFEYINNNLKNNPKPSATAMQAEAYYLQSTLKNIEKIVMVSH
HHHCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEC
SAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQFNHSQNNILASLSSQTARLSNSLNS
CCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHH
LDPSAHSKNISNMYGVTLSVGYKHFFTKKRNQGFRYYLFYDYGYTHFSFAGNGIGLGKMN
CCCCCCCCCCCHHEEEEEEECHHHHHHHHCCCCEEEEEEEECCCEEEEECCCCEEECCCC
NHLYGLGVDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLSLWISQMDFINNYLTNYQ
CCEEECCHHHHHHHHHCHHHCCCCEEEEEEEECCCCHHCCHHHHHHHHHHHHHHHHHCCH
AEMHTSFFQIPLNFGFRVNVDRHNGFEMGLKIPLAINSFYETHGKGLNTSLFFKRLVMFN
HHHCCEEEEEEECCCEEEEEECCCCEEECEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHH
VSYVYSF
HHHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA