| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is galU [H]
Identifier: 109947603
GI number: 109947603
Start: 924474
End: 925295
Strand: Reverse
Name: galU [H]
Synonym: Hac_1068
Alternate gene names: 109947603
Gene position: 925295-924474 (Counterclockwise)
Preceding gene: 109947604
Following gene: 109947602
Centisome position: 59.55
GC content: 42.7
Gene sequence:
>822_bases ATGATTAAAAAATGCCTTTTTCCTGCCGCCGGCTATGGCACACGCTTTTTGCCGATCACTAAAACCATCCCTAAAGAGAT GCTACCCATTGTGGATAAACCTCTCATGCAATACGCTGTGGAGGAAGCGATGGAGGCAGGCTGTGAAGTGATGGCGATTG TGACAGGAAGAAACAAACGCAGTTTGGAAGATTATTTTGACACGAGCTATGAAATAGAGCACCAGATCCAAGGCACCAAC AAAGAAAAAGCGTTGCAAAGCGTTCGTAACATTATAGAAAAATGCTGTTTTTCCTATGTGCGCCAGAAACAAATGAAAGG TTTGGGGCATGCGATTTTAACCGGAGAAGCCCTTATAGGCAATGAACCTTTTGCAGTGATTTTAGCCGATGATTTATGCA CTAGCCACAACCACCCAAGCGTGTTGAAGCAAATGACTTCACTGTATCAAAAATACCAATGCTCTATCGTGGCTATTGAA GAAGTGGCGTTAGAAGAAGTTTCAAAATACGGCGTGATTAAGGGCGAATTGTTAGAAGAGGGGGTATATGAAATTAAAGA CATGGTGGAAAAACCAAGCCAACAAGACGCCCCAAGCAATTTAGCCGTGATAGGGCGCTATATTTTAACCCCGGATATTT TTGAGATTTTGCACGAGACTAAACCGGGTAAAAACAATGAAATCCAAATCACAGACGCCTTGCTCACTCAAGCCAAAAGA AAACGCATCATCGCTTACCAGTTCAAAGGCAAACGATACGATTGCGGGAGTGTGGAAGGCTATATTGAAGCGACAAATGC CTATTATAAAGAACGCTTATAA
Upstream 100 bases:
>100_bases GCTTTAGGGTCATGCTCAATTACTTGATTTATCAAGAAATTTTTGGGAATTTCATCCCCATTGATGCATTTTTAGAACAA ACTCTTACAAAGGACAACTC
Downstream 100 bases:
>100_bases ACCTTAATCCATGGGCAGTTTGACTTATTACGCTTTCATGTATTTGATCCTGTTTGTATGCTTGCTCCCTGTGTTATTGT TGGGGCTTGTTTGGAGGCTT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KEKALQSVRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCTSHNHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGELLEEGVYEIKDMVEKPSQQDAPSNLAVIGRYILTPDIFEILHETKPGKNNEIQITDALLTQAKR KRIIAYQFKGKRYDCGSVEGYIEATNAYYKERL
Sequences:
>Translated_273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KEKALQSVRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCTSHNHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGELLEEGVYEIKDMVEKPSQQDAPSNLAVIGRYILTPDIFEILHETKPGKNNEIQITDALLTQAKR KRIIAYQFKGKRYDCGSVEGYIEATNAYYKERL >Mature_273_residues MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMEAGCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQGTN KEKALQSVRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCTSHNHPSVLKQMTSLYQKYQCSIVAIE EVALEEVSKYGVIKGELLEEGVYEIKDMVEKPSQQDAPSNLAVIGRYILTPDIFEILHETKPGKNNEIQITDALLTQAKR KRIIAYQFKGKRYDCGSVEGYIEATNAYYKERL
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=274, Percent_Identity=42.7007299270073, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788355, Length=273, Percent_Identity=38.8278388278388, Blast_Score=171, Evalue=5e-44, Organism=Escherichia coli, GI1788351, Length=268, Percent_Identity=25.7462686567164, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1790224, Length=229, Percent_Identity=27.5109170305677, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 30874; Mature: 30874
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMEAGCEVMAIVTGRNKR CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC SLEDYFDTSYEIEHQIQGTNKEKALQSVRNIIEKCCFSYVRQKQMKGLGHAILTGEALIG HHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC NEPFAVILADDLCTSHNHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGELLEE CCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH GVYEIKDMVEKPSQQDAPSNLAVIGRYILTPDIFEILHETKPGKNNEIQITDALLTQAKR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH KRIIAYQFKGKRYDCGSVEGYIEATNAYYKERL CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIKKCLFPAAGYGTRFLPITKTIPKEMLPIVDKPLMQYAVEEAMEAGCEVMAIVTGRNKR CCCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC SLEDYFDTSYEIEHQIQGTNKEKALQSVRNIIEKCCFSYVRQKQMKGLGHAILTGEALIG HHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCEEEC NEPFAVILADDLCTSHNHPSVLKQMTSLYQKYQCSIVAIEEVALEEVSKYGVIKGELLEE CCCEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH GVYEIKDMVEKPSQQDAPSNLAVIGRYILTPDIFEILHETKPGKNNEIQITDALLTQAKR HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHH KRIIAYQFKGKRYDCGSVEGYIEATNAYYKERL CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]