| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947602
Identifier: 109947602
GI number: 109947602
Start: 924056
End: 924463
Strand: Reverse
Name: 109947602
Synonym: Hac_1067
Alternate gene names: NA
Gene position: 924463-924056 (Counterclockwise)
Preceding gene: 109947603
Following gene: 109947601
Centisome position: 59.49
GC content: 36.76
Gene sequence:
>408_bases ATGGGCAGTTTGACTTATTACGCTTTCATGTATTTGATCCTGTTTGTATGCTTGCTCCCTGTGTTATTGTTGGGGCTTGT TTGGAGGCTTTTTCGCACCCCTTTAAAACAAGAAATACCCAATATAAGCGTCTCTTTAGAAAGTTTGAGCGAACAAGTGA AAAACCTCAAAAGCGAGTTAGCTTTGCAAAAACTTAAAAATAGCTTTAATGAGCGTTTTAAGATTTGCCCTAAAGATAAA GAGACTCTGTGGTTAGAAACGATCCAAAATTTAGTTTCTTCAGAGTTTTTTGAATTGGAAAGTGCCATCAATTTTGGGCA GGATTTAGAAAACGCTAACCCCAACTACGCGCAAAAAATCGCTAACACTACCGGTTTAGCCCTTAAAAATAAAAAAGAAA AAGGATAG
Upstream 100 bases:
>100_bases GCTTACCAGTTCAAAGGCAAACGATACGATTGCGGGAGTGTGGAAGGCTATATTGAAGCGACAAATGCCTATTATAAAGA ACGCTTATAAACCTTAATCC
Downstream 100 bases:
>100_bases AATTGGACTTTTTAGAGATTGTAGGACAAATCCCTTTAAAAGGGGGGGTAGAAATTTCTGGGGCTAAAAATTCCGCGCTC CCCATTTTAGCCGCCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MGSLTYYAFMYLILFVCLLPVLLLGLVWRLFRTPLKQEIPNISVSLESLSEQVKNLKSELALQKLKNSFNERFKICPKDK ETLWLETIQNLVSSEFFELESAINFGQDLENANPNYAQKIANTTGLALKNKKEKG
Sequences:
>Translated_135_residues MGSLTYYAFMYLILFVCLLPVLLLGLVWRLFRTPLKQEIPNISVSLESLSEQVKNLKSELALQKLKNSFNERFKICPKDK ETLWLETIQNLVSSEFFELESAINFGQDLENANPNYAQKIANTTGLALKNKKEKG >Mature_134_residues GSLTYYAFMYLILFVCLLPVLLLGLVWRLFRTPLKQEIPNISVSLESLSEQVKNLKSELALQKLKNSFNERFKICPKDKE TLWLETIQNLVSSEFFELESAINFGQDLENANPNYAQKIANTTGLALKNKKEKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15476; Mature: 15345
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLTYYAFMYLILFVCLLPVLLLGLVWRLFRTPLKQEIPNISVSLESLSEQVKNLKSEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHH ALQKLKNSFNERFKICPKDKETLWLETIQNLVSSEFFELESAINFGQDLENANPNYAQKI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ANTTGLALKNKKEKG HHHHHHHHCCCCCCC >Mature Secondary Structure GSLTYYAFMYLILFVCLLPVLLLGLVWRLFRTPLKQEIPNISVSLESLSEQVKNLKSEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHH ALQKLKNSFNERFKICPKDKETLWLETIQNLVSSEFFELESAINFGQDLENANPNYAQKI HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH ANTTGLALKNKKEKG HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA