Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947559

Identifier: 109947559

GI number: 109947559

Start: 889650

End: 890663

Strand: Reverse

Name: 109947559

Synonym: Hac_1024

Alternate gene names: NA

Gene position: 890663-889650 (Counterclockwise)

Preceding gene: 109947560

Following gene: 109947558

Centisome position: 57.32

GC content: 33.53

Gene sequence:

>1014_bases
ATGCGTTTTTACATTATCTTTGCATTTTTGTTTATTGTGGGTTTTGGCGTGTTTGTTTATAGTATTGATCCGCAAGCTTA
TGCTTTCAATTTAGGGAGTTATAGTTTTAACCTTCCCATAGCGGTATGGCTTATGGGTGTTTTGGGCATGTTCGCTTTTT
TTTCATGGGTTTTTTTATTCAAACACAATATTAGCCAAAAAATCCGCCTATACCATGAAAAAAGGGATTTTGACAAATTG
CTCAAACAAATTCTATCCCAAGACACTCAAAAGACTTTTTTAAAAACGAAATTTAAAAGCGATCTTGCTAAAAACCTTTC
TCAAATCTTAGCCCGCTATGATTTAAAAGCTGATTTAAACACGCCAAATAGTGGGTGCGAAAAAGTGGATAACCTTTTTA
AGCATTACCACAATATAGAAAACAACACCCTTGAGCCTAAAGATCACACCAAGCACTCTTTAGCTTATGAGCATGCTTAT
TTTTCTAAACGCTTGAAAGCTTTCATTGATAACGATTTAAAAAACGCCTTTGAGGTTTTAACAAACGAGCAAATCCCTTT
AGACTTGCGCCGCTATGCATTCATAGAAATCGCTCAAAAAGGGGATAAAAAAGAGATTTTAAAGGCTTTGAAGACGATGC
AAGATGACTTGAATAAAGAATGCGTGAAATCTTTTCTAAAAGCCTTTTTTGAAAAATCCTTAAACACAGATACTTTAAAG
ATTTCAGAGCTTTGCAAAAAGGTGGGTTATGATAAGAATGATTATTTAAAGCTCGCGCAAAAAGCGCAAAAATTCCTTGT
CCCAGATAAATGGTTCCAGTTTTTTGAGATTTTAAGCCAAGAAGACGACAAGGCTCAAAAAGCTTTTTTGTTTGTGTTAT
TAGAATTAGAAATGAATGATCTAGCTAAAGAGCATCTAGAGATCTTGCCTTTTGAAGATTACATGCTTTTAAACGCTTAT
ATGGATTTGAAAAAAGAATCTAAAAAAGCCTATAAATTAGAAGCGTTTTTGTAA

Upstream 100 bases:

>100_bases
GACTTTTAGCCATGAAGTGGCTAAGATTGTTTTATGCGAGCAAATTTATAGGGCTTTAAGCATTATTTTTAGGCATCCAT
ACCATAAATAGGAGGTGCAC

Downstream 100 bases:

>100_bases
AGGCTTTGTTTATTTTCTTTAAAAAAGTGTTAATCATGGATAAAAAGAGTGATTTTAAGGGTAAGCTTGCCTAAATTACA
CTAAAATAACAAGCGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRFYIIFAFLFIVGFGVFVYSIDPQAYAFNLGSYSFNLPIAVWLMGVLGMFAFFSWVFLFKHNISQKIRLYHEKRDFDKL
LKQILSQDTQKTFLKTKFKSDLAKNLSQILARYDLKADLNTPNSGCEKVDNLFKHYHNIENNTLEPKDHTKHSLAYEHAY
FSKRLKAFIDNDLKNAFEVLTNEQIPLDLRRYAFIEIAQKGDKKEILKALKTMQDDLNKECVKSFLKAFFEKSLNTDTLK
ISELCKKVGYDKNDYLKLAQKAQKFLVPDKWFQFFEILSQEDDKAQKAFLFVLLELEMNDLAKEHLEILPFEDYMLLNAY
MDLKKESKKAYKLEAFL

Sequences:

>Translated_337_residues
MRFYIIFAFLFIVGFGVFVYSIDPQAYAFNLGSYSFNLPIAVWLMGVLGMFAFFSWVFLFKHNISQKIRLYHEKRDFDKL
LKQILSQDTQKTFLKTKFKSDLAKNLSQILARYDLKADLNTPNSGCEKVDNLFKHYHNIENNTLEPKDHTKHSLAYEHAY
FSKRLKAFIDNDLKNAFEVLTNEQIPLDLRRYAFIEIAQKGDKKEILKALKTMQDDLNKECVKSFLKAFFEKSLNTDTLK
ISELCKKVGYDKNDYLKLAQKAQKFLVPDKWFQFFEILSQEDDKAQKAFLFVLLELEMNDLAKEHLEILPFEDYMLLNAY
MDLKKESKKAYKLEAFL
>Mature_337_residues
MRFYIIFAFLFIVGFGVFVYSIDPQAYAFNLGSYSFNLPIAVWLMGVLGMFAFFSWVFLFKHNISQKIRLYHEKRDFDKL
LKQILSQDTQKTFLKTKFKSDLAKNLSQILARYDLKADLNTPNSGCEKVDNLFKHYHNIENNTLEPKDHTKHSLAYEHAY
FSKRLKAFIDNDLKNAFEVLTNEQIPLDLRRYAFIEIAQKGDKKEILKALKTMQDDLNKECVKSFLKAFFEKSLNTDTLK
ISELCKKVGYDKNDYLKLAQKAQKFLVPDKWFQFFEILSQEDDKAQKAFLFVLLELEMNDLAKEHLEILPFEDYMLLNAY
MDLKKESKKAYKLEAFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39777; Mature: 39777

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA