Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is 109947558

Identifier: 109947558

GI number: 109947558

Start: 888968

End: 889522

Strand: Reverse

Name: 109947558

Synonym: Hac_1023

Alternate gene names: NA

Gene position: 889522-888968 (Counterclockwise)

Preceding gene: 109947559

Following gene: 109947557

Centisome position: 57.24

GC content: 41.08

Gene sequence:

>555_bases
ATGAAAAAAATGGTTTTGGGATCGCTTTTGTTAGCGGGGCTTTTGCAGGCGGTGAGTTTGGATCTCACTTCGGCTAAAAC
GACATGGACAGCCTTTAAAAATAAGTCTAAAGCACCGGTGAGTGGGACTTTTGATCACATCACTTACAAATTAGGCAAAT
CGCAAAGCAGTTTAAAAACCCTTTTAGAGGGGGCGAATGCGAGCATGGATGGCTTGAAAGTCAATTTGGGTGATGAATTG
AAAAATAAGAATGTCCAAGAGGCTTTTTTCGCTCTTTTTAAAAGTACTCAGATTAAAGTCACTTTTAGAAATGTTGTAGA
GGGCGATCATCTAGGTTCGCTCACCGCTTATGTGAGGATGAATGAAAAGTTGGTGAAAGTGCCTATGCAATACACCATCA
CAGACAATAAGCTCGTGATTAAAGGGGTGCTAGACATTTTGAATTTTGGCTTGAAAAACGAATTAGCGAGCTTAGCCAAA
CGATGCGAGAGTTTTCATGAGAGCTTGACCTGGTCGCAAGTGGAGATCCAATTTGAAAGCATGATCAAGGGATAA

Upstream 100 bases:

>100_bases
TGTTAATCATGGATAAAAAGAGTGATTTTAAGGGTAAGCTTGCCTAAATTACACTAAAATAACAAGCGTTTTAACTTACT
CCACGATAAAAGGATAATGA

Downstream 100 bases:

>100_bases
TTTAAAATCATGGAGTTGTTGCATAGTATCAATGATTTTAATGAAGCCAAACAGGTGATCGTTGGGGGGGTCAATTCGCC
TGTGAGGGCGTTTAAGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKMVLGSLLLAGLLQAVSLDLTSAKTTWTAFKNKSKAPVSGTFDHITYKLGKSQSSLKTLLEGANASMDGLKVNLGDEL
KNKNVQEAFFALFKSTQIKVTFRNVVEGDHLGSLTAYVRMNEKLVKVPMQYTITDNKLVIKGVLDILNFGLKNELASLAK
RCESFHESLTWSQVEIQFESMIKG

Sequences:

>Translated_184_residues
MKKMVLGSLLLAGLLQAVSLDLTSAKTTWTAFKNKSKAPVSGTFDHITYKLGKSQSSLKTLLEGANASMDGLKVNLGDEL
KNKNVQEAFFALFKSTQIKVTFRNVVEGDHLGSLTAYVRMNEKLVKVPMQYTITDNKLVIKGVLDILNFGLKNELASLAK
RCESFHESLTWSQVEIQFESMIKG
>Mature_184_residues
MKKMVLGSLLLAGLLQAVSLDLTSAKTTWTAFKNKSKAPVSGTFDHITYKLGKSQSSLKTLLEGANASMDGLKVNLGDEL
KNKNVQEAFFALFKSTQIKVTFRNVVEGDHLGSLTAYVRMNEKLVKVPMQYTITDNKLVIKGVLDILNFGLKNELASLAK
RCESFHESLTWSQVEIQFESMIKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20363; Mature: 20363

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMVLGSLLLAGLLQAVSLDLTSAKTTWTAFKNKSKAPVSGTFDHITYKLGKSQSSLKT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHH
LLEGANASMDGLKVNLGDELKNKNVQEAFFALFKSTQIKVTFRNVVEGDHLGSLTAYVRM
HHHCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHCCEEEEEEHHHHCCCCCCHHHHEEEE
NEKLVKVPMQYTITDNKLVIKGVLDILNFGLKNELASLAKRCESFHESLTWSQVEIQFES
CCHHEECCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHEEEHHH
MIKG
HCCC
>Mature Secondary Structure
MKKMVLGSLLLAGLLQAVSLDLTSAKTTWTAFKNKSKAPVSGTFDHITYKLGKSQSSLKT
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHH
LLEGANASMDGLKVNLGDELKNKNVQEAFFALFKSTQIKVTFRNVVEGDHLGSLTAYVRM
HHHCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHCCEEEEEEHHHHCCCCCCHHHHEEEE
NEKLVKVPMQYTITDNKLVIKGVLDILNFGLKNELASLAKRCESFHESLTWSQVEIQFES
CCHHEECCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHEEEHHH
MIKG
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA