Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is 109947138

Identifier: 109947138

GI number: 109947138

Start: 472075

End: 472593

Strand: Direct

Name: 109947138

Synonym: Hac_0547

Alternate gene names: NA

Gene position: 472075-472593 (Clockwise)

Preceding gene: 109947137

Following gene: 109947139

Centisome position: 30.38

GC content: 34.68

Gene sequence:

>519_bases
ATGCGTTTTTTTAGTGGTTTTGGGTTTGTTAATGAAAGCGTGTTGTTTGAAGAGTGGCTTTTAAAAGGGGCTTATGATGT
GTCAGGCTTTTCTATGGGGGCTATTAAGGCGATAGAATACGCCTATAATGAAGTCTTACAACAACGACGCATCAATTCCT
TATTATTGTTTTCGCCTTGCATGTTGGCCCATAAGAGTTTGGCGTTCAAACGATTGCAACTTTATTCTTTTCAAAAAGAC
CCACAAAGCTACATGGATAACTTTTATCAAGCAGTGGGTTTGGACGCTCAATTAGAGCGTTTTAAAAAAATGGGTTCTTT
AGAAGAATTGGAATTTTTATTGAATTACAAGTATAGTGATCATACAATTAGGCTTTTATTAGAAAAAGGCGTGAAAATTG
AAGTGTTTATCGGTTTAAAAGACAAAATTACTGATATTCAAGCTTTGTTGGAATTTTTCATGCCTTTAGCCCAAGTGTGG
CAGTTTAAAAGCTATAACCATTTGTTGCAAAAATCTTAA

Upstream 100 bases:

>100_bases
AAAACCACAAATAACGACTTGCAAGCGATTGAGCGCTCTGTTGTTAGAGCAAGAATATTTAGAGTATTCTAATTTGTATG
ATTTATTGAATGGGTGAAAA

Downstream 100 bases:

>100_bases
AAAAGGTGGAAGATGAAAAAGATTAGTTTAAAAATCAGTTTAGGGGTGTATTTGCTTCTTTTAGGCATTTTGGGTGGCTC
TTTGATCATTTTAGGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD
PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW
QFKSYNHLLQKS

Sequences:

>Translated_172_residues
MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD
PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW
QFKSYNHLLQKS
>Mature_172_residues
MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPCMLAHKSLAFKRLQLYSFQKD
PQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSDHTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVW
QFKSYNHLLQKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20187; Mature: 20187

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPC
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAHKSLAFKRLQLYSFQKDPQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCC
HTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVWQFKSYNHLLQKS
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFFSGFGFVNESVLFEEWLLKGAYDVSGFSMGAIKAIEYAYNEVLQQRRINSLLLFSPC
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLAHKSLAFKRLQLYSFQKDPQSYMDNFYQAVGLDAQLERFKKMGSLEELEFLLNYKYSD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCC
HTIRLLLEKGVKIEVFIGLKDKITDIQALLEFFMPLAQVWQFKSYNHLLQKS
HHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA