| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812405
Identifier: 108812405
GI number: 108812405
Start: 2529031
End: 2529303
Strand: Reverse
Name: 108812405
Synonym: YPN_2244
Alternate gene names: NA
Gene position: 2529303-2529031 (Counterclockwise)
Preceding gene: 108812415
Following gene: 108812404
Centisome position: 55.78
GC content: 44.69
Gene sequence:
>273_bases ATGGACATATCTTACGACCCAATCAAAAACGAAAAAAATATTGCTGAACGTAAACTGTCCTTTGAGATGGCGCGTGATTT CGAAGTTGCTACAGCGCTAATTGTTGAGGATCTCCGTAAGGAATATCCAGAGCGGCGCTTCCAGGCACTGGGCTACATTG AAGAGCGGTTACATATGTTGGTATTCACACCACGTAACGGCAAGGTGCATGTTATCAGCCTGCGTAAGGCCAATTCCCGT GAGGTAAAGCGATATGAACAAAAGAATCAGTAA
Upstream 100 bases:
>100_bases GTGATGGGTTTTGTGTGAGGGATGGCACAAAGGAAATGAAATAAAGTATGAATGCTAATATCTCTTGCATTAATGTATTT ATTGGGGGTACATTAATTTC
Downstream 100 bases:
>100_bases AGTCACCATGACAGATAACCCCGAGTGGGGCGAGGCAGAGTTTGCCCGCGCACGTCCTGCCACAGAGGTGTTTACCGAGT TGTTTGGTAAAGAGGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHMLVFTPRNGKVHVISLRKANSR EVKRYEQKNQ
Sequences:
>Translated_90_residues MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHMLVFTPRNGKVHVISLRKANSR EVKRYEQKNQ >Mature_90_residues MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHMLVFTPRNGKVHVISLRKANSR EVKRYEQKNQ
Specific function: Unknown
COG id: COG2929
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10799; Mature: 10799
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHML CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE VFTPRNGKVHVISLRKANSREVKRYEQKNQ EEECCCCCEEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MDISYDPIKNEKNIAERKLSFEMARDFEVATALIVEDLRKEYPERRFQALGYIEERLHML CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE VFTPRNGKVHVISLRKANSREVKRYEQKNQ EEECCCCCEEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA