Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812415

Identifier: 108812415

GI number: 108812415

Start: 2534543

End: 2534716

Strand: Reverse

Name: 108812415

Synonym: YPN_2254

Alternate gene names: NA

Gene position: 2534716-2534543 (Counterclockwise)

Preceding gene: 108812416

Following gene: 108812405

Centisome position: 55.9

GC content: 35.06

Gene sequence:

>174_bases
ATGATTTATAGCAAGCAATCTGCTGATGCTGTACTAGAAAAATATTTTGATGCATTCATAAAAAACGCATCAACCGTGAT
ATTTGATACTGTTGAAAATTTAGATTTAGGTGCTGGGCGAGCATTTATGACAGTATCGCCCGAAATTATACCGGAACTAA
CAATGTATCCTTAG

Upstream 100 bases:

>100_bases
GGATGGATCACCGACGAAGGTATTTAAACAATATGTTGATTTTTTTTTGCTTATTAATACATAATACTGAATTATCTCAT
TATAAAAGGGAATTCATTAA

Downstream 100 bases:

>100_bases
TATGATGAAATTATCAAAAAATACTTATCTGCAAACAGAGAACTCATTCTTGTAAAAAATAAAAGAATGGAATAGAAATG
CTTTACTTTCTAATAGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP

Sequences:

>Translated_57_residues
MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP
>Mature_57_residues
MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6363; Mature: 6363

Theoretical pI: Translated: 4.06; Mature: 4.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIYSKQSADAVLEKYFDAFIKNASTVIFDTVENLDLGAGRAFMTVSPEIIPELTMYP
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA