Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812404

Identifier: 108812404

GI number: 108812404

Start: 2528760

End: 2529050

Strand: Reverse

Name: 108812404

Synonym: YPN_2243

Alternate gene names: NA

Gene position: 2529050-2528760 (Counterclockwise)

Preceding gene: 108812405

Following gene: 108812403

Centisome position: 55.77

GC content: 51.55

Gene sequence:

>291_bases
ATGAACAAAAGAATCAGTAAAGTCACCATGACAGATAACCCCGAGTGGGGCGAGGCAGAGTTTGCCCGCGCACGTCCTGC
CACAGAGGTGTTTACCGAGTTGTTTGGTAAAGAGGGCGCAGAAAAGGTGATAAAAACCCGTGGCCGGCCAAAACTGGCAA
ACCCGAAAGAACCGGTTAAGCTACGGATTGATCACGATGTGGTGGACGCCTATCGGGCGCAGGGTGATGGATGGCAAACC
AAAATGAATGAGGCACTGCGCGATTATGCTAAAACACATGGGATGCTGTGA

Upstream 100 bases:

>100_bases
TACATTGAAGAGCGGTTACATATGTTGGTATTCACACCACGTAACGGCAAGGTGCATGTTATCAGCCTGCGTAAGGCCAA
TTCCCGTGAGGTAAAGCGAT

Downstream 100 bases:

>100_bases
TTTATTAGGCGTTATTTTCAATAACCAATCAAAGCTCACTCAAAGAAGCCACTAAGAGGGACATTATGGCAAGCTGCATC
CCCCCAAAGGTTCCCGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT
KMNEALRDYAKTHGML

Sequences:

>Translated_96_residues
MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT
KMNEALRDYAKTHGML
>Mature_96_residues
MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT
KMNEALRDYAKTHGML

Specific function: Unknown

COG id: COG3514

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10945; Mature: 10945

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVK
CCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEE
LRIDHDVVDAYRAQGDGWQTKMNEALRDYAKTHGML
EEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVK
CCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEE
LRIDHDVVDAYRAQGDGWQTKMNEALRDYAKTHGML
EEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA