| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108812404
Identifier: 108812404
GI number: 108812404
Start: 2528760
End: 2529050
Strand: Reverse
Name: 108812404
Synonym: YPN_2243
Alternate gene names: NA
Gene position: 2529050-2528760 (Counterclockwise)
Preceding gene: 108812405
Following gene: 108812403
Centisome position: 55.77
GC content: 51.55
Gene sequence:
>291_bases ATGAACAAAAGAATCAGTAAAGTCACCATGACAGATAACCCCGAGTGGGGCGAGGCAGAGTTTGCCCGCGCACGTCCTGC CACAGAGGTGTTTACCGAGTTGTTTGGTAAAGAGGGCGCAGAAAAGGTGATAAAAACCCGTGGCCGGCCAAAACTGGCAA ACCCGAAAGAACCGGTTAAGCTACGGATTGATCACGATGTGGTGGACGCCTATCGGGCGCAGGGTGATGGATGGCAAACC AAAATGAATGAGGCACTGCGCGATTATGCTAAAACACATGGGATGCTGTGA
Upstream 100 bases:
>100_bases TACATTGAAGAGCGGTTACATATGTTGGTATTCACACCACGTAACGGCAAGGTGCATGTTATCAGCCTGCGTAAGGCCAA TTCCCGTGAGGTAAAGCGAT
Downstream 100 bases:
>100_bases TTTATTAGGCGTTATTTTCAATAACCAATCAAAGCTCACTCAAAGAAGCCACTAAGAGGGACATTATGGCAAGCTGCATC CCCCCAAAGGTTCCCGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT KMNEALRDYAKTHGML
Sequences:
>Translated_96_residues MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT KMNEALRDYAKTHGML >Mature_96_residues MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVKLRIDHDVVDAYRAQGDGWQT KMNEALRDYAKTHGML
Specific function: Unknown
COG id: COG3514
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10945; Mature: 10945
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVK CCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEE LRIDHDVVDAYRAQGDGWQTKMNEALRDYAKTHGML EEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKRISKVTMTDNPEWGEAEFARARPATEVFTELFGKEGAEKVIKTRGRPKLANPKEPVK CCCCCCEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCEE LRIDHDVVDAYRAQGDGWQTKMNEALRDYAKTHGML EEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA