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The map label for this gene is 108812380

Identifier: 108812380

GI number: 108812380

Start: 2504371

End: 2504850

Strand: Reverse

Name: 108812380

Synonym: YPN_2219

Alternate gene names: NA

Gene position: 2504850-2504371 (Counterclockwise)

Preceding gene: 108812381

Following gene: 108812379

Centisome position: 55.24

GC content: 44.79

Gene sequence:

>480_bases
ATGGAAAAGAAAAAACAGTTTTTACCGGCGTTGTTAGAGCGTTTACTCGATGATGAGCCTAAAAAGCATATTGAGCCTCA
CGATAAATTCTTTTATGACTCACGGACGATGCGGAAATTGGTACAACGTAATATTTCAGAGATATTAAATAATGCCAATA
TTGAAGACCGGTTGGATCCGCAGCGTCATAAATGGGTAGCGACGTCGGTCTTAAACTATGGTATTTCACCCCTGGTCGGG
CTTTATGCCGTGCCGCATAATTGGGCGACTATTGAACGAATTATCAGAGAGGCCATTATCCGTTTTGAACCACGGATAAT
GGCGGAATCTCTCGTTGTCAGCCAGCAACTCCAGGCCAGGAATGGCATTATACAGTTTGAGATTAGGGGGTTAATCAAAT
GGAACCCGCACCCTATCGATCTTTGTATTGAAGGTGCCTATGACGTTGAGACGGATAACGCAGAGCTACGCGCCCGTTGA

Upstream 100 bases:

>100_bases
TTGAAATAGATTATGTTTGAAATAGATTATGTTTGAAATAGATTATGTTTGATAACACATGTATTAGATAAAAAATGTAT
TTGCGCCAACAGGCTGAGTA

Downstream 100 bases:

>100_bases
GCCACGGTGAGTAAAGAGTTATTCATGTCATTAAGCAGAAAAGCCGCCAAGGCACAAGACCATAAAATACGAGAACAACT
CAAGCGTATGGATAACATCG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEKKKQFLPALLERLLDDEPKKHIEPHDKFFYDSRTMRKLVQRNISEILNNANIEDRLDPQRHKWVATSVLNYGISPLVG
LYAVPHNWATIERIIREAIIRFEPRIMAESLVVSQQLQARNGIIQFEIRGLIKWNPHPIDLCIEGAYDVETDNAELRAR

Sequences:

>Translated_159_residues
MEKKKQFLPALLERLLDDEPKKHIEPHDKFFYDSRTMRKLVQRNISEILNNANIEDRLDPQRHKWVATSVLNYGISPLVG
LYAVPHNWATIERIIREAIIRFEPRIMAESLVVSQQLQARNGIIQFEIRGLIKWNPHPIDLCIEGAYDVETDNAELRAR
>Mature_159_residues
MEKKKQFLPALLERLLDDEPKKHIEPHDKFFYDSRTMRKLVQRNISEILNNANIEDRLDPQRHKWVATSVLNYGISPLVG
LYAVPHNWATIERIIREAIIRFEPRIMAESLVVSQQLQARNGIIQFEIRGLIKWNPHPIDLCIEGAYDVETDNAELRAR

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18651; Mature: 18651

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKKQFLPALLERLLDDEPKKHIEPHDKFFYDSRTMRKLVQRNISEILNNANIEDRLDP
CCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH
QRHKWVATSVLNYGISPLVGLYAVPHNWATIERIIREAIIRFEPRIMAESLVVSQQLQAR
HHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NGIIQFEIRGLIKWNPHPIDLCIEGAYDVETDNAELRAR
CCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKKKQFLPALLERLLDDEPKKHIEPHDKFFYDSRTMRKLVQRNISEILNNANIEDRLDP
CCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCH
QRHKWVATSVLNYGISPLVGLYAVPHNWATIERIIREAIIRFEPRIMAESLVVSQQLQAR
HHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NGIIQFEIRGLIKWNPHPIDLCIEGAYDVETDNAELRAR
CCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA