Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812379

Identifier: 108812379

GI number: 108812379

Start: 2503999

End: 2504364

Strand: Reverse

Name: 108812379

Synonym: YPN_2218

Alternate gene names: NA

Gene position: 2504364-2503999 (Counterclockwise)

Preceding gene: 108812380

Following gene: 108812375

Centisome position: 55.23

GC content: 43.99

Gene sequence:

>366_bases
GTGAGTAAAGAGTTATTCATGTCATTAAGCAGAAAAGCCGCCAAGGCACAAGACCATAAAATACGAGAACAACTCAAGCG
TATGGATAACATCGCTGTTGCTCTATTTTTTGCTATTCCGCTGTGTCTGGCCCTTATTGGCGGGCGTCAGTTGGCGGTAT
GGACACTACCTGGGTGGTATCTCTATAGCCTTGGATACATCATTAGTTTCCGGGTTGTTAGCAAAAAATTCACCACCAAA
GAGGGGACGGAAATTGCCAGATTCACCAGAACGTATCCTTTCCACTCAGTCAGTTGGCTTATTTTTATTGGCTTTAGCCT
ACTTTCTATAATCGTTATTATCGATGTTATGTCCGGAGCGCGCTGA

Upstream 100 bases:

>100_bases
GGGGTTAATCAAATGGAACCCGCACCCTATCGATCTTTGTATTGAAGGTGCCTATGACGTTGAGACGGATAACGCAGAGC
TACGCGCCCGTTGAGCCACG

Downstream 100 bases:

>100_bases
TATTCCAGGATAATAAGATCTTCCAAGATAATAGAAGGGCTCTCTGCTTGGGTGGCAAAGAACCCATTAATGCATTAGCT
TTTCTTAACAAATTCAGACT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSKELFMSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTK
EGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR

Sequences:

>Translated_121_residues
MSKELFMSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTK
EGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR
>Mature_120_residues
SKELFMSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWYLYSLGYIISFRVVSKKFTTKE
GTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13807; Mature: 13675

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELFMSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
LYSLGYIISFRVVSKKFTTKEGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C
>Mature Secondary Structure 
SKELFMSLSRKAAKAQDHKIREQLKRMDNIAVALFFAIPLCLALIGGRQLAVWTLPGWY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH
LYSLGYIISFRVVSKKFTTKEGTEIARFTRTYPFHSVSWLIFIGFSLLSIIVIIDVMSGA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA