| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is menC [H]
Identifier: 108812281
GI number: 108812281
Start: 2395080
End: 2396051
Strand: Reverse
Name: menC [H]
Synonym: YPN_2119
Alternate gene names: 108812281
Gene position: 2396051-2395080 (Counterclockwise)
Preceding gene: 108812282
Following gene: 108812280
Centisome position: 52.84
GC content: 57.0
Gene sequence:
>972_bases ATGCGCACGGCTACCCTTTACCGCTACAGTGTACCGATGGAAGCGGGGGTGATACTGCGCCATCAGCGGCTGAAAAGTCG CGATGGGTTGCTGGTCAAATTACAGCAAGGTGAATTGAGCGGCTGGGGCGAAATTGCCCCGTTACCGGAATTCAGTCAAG AAACACTGGATCAAGCCCAAGTGGCGGCAGAGTGTTGGCTGCAACACTGGGTCAGTGGTGTCGAATCGGATGACAGCGTG TTGCCCTCCGTGGCTTTTGGTCTCAGTTGTGCGCAGGCCGAACTCAAGCAAACCTTACCGCTGTCAGCGGATTATCGCAA AGCGCCACTGTGTACCGGCGATCCTGATGAGCTGTTTGCGGTACTCCAGGCATTGCCGGGTGAGAAGGTTGCCAAGGTGA AGGTCGGGCTGTATGAAGCGGTGCGTGATGGCATGATCGTTAATGTTCTGTTGGAAGCCCTGCCTGATCTGACACTGCGG CTGGACGCTAATCGCAGTTGGAGCCGAGCGAAGGCCGATGGGTTCGCGAAGTATGTCAATCCGGCGCTGCGTTCGCGTAT TGCCTTTCTGGAGGAACCGTGCAAAACCCGCGCTGAATCCCGTGAGTTTGCTCAAGATACCGGTATTGCTATTGCCTGGG ATGAAAGTGTGCGTGAGGCGGATTTTCAGGTTGAAGCCGAGCCGGGAGTGGCGGCAATTGTGATCAAACCAACGCTGGTG GGCAGTCTTGCTCGCTGTCAGCAACTGGTTCAACAAGCGCATCAGGCCGGTTTGGTTGCGGTTATTAGCTCCAGTATTGA ATCCAGTCTGGGTCTGACGCAATTGGCCCGTTTGGCCGCTTGGTTGACCCCCGTCACGGTTCCGGGGTTGGATACGCTGG ACCTGATGCAGGCGCAAGTCGTGCGGCCGTGGCCAGACAGCCCGTTGCCGCTAATCACGACCGAGCAGTTGGGCGTGGTA TGGCATCGTTAG
Upstream 100 bases:
>100_bases CCACCATGCTGTTCTATATGACCGATGAAGGGCAGGAGGGGCGTAACGCATTCAATGAAAAACGCCAACCGGACTTCAGC AAATTCAAGCGTAATCCGTA
Downstream 100 bases:
>100_bases GCCATCCGCCTTGGGAGCATTGGCCTTGGCAGTATTGGGCCAATCTGCGGCCTCAAGCGCTCGCTATCCGTTCTGGGGGG CAACGGATCAGTTGGCAACA
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRTATLYRYSVPMEAGVILRHQRLKSRDGLLVKLQQGELSGWGEIAPLPEFSQETLDQAQVAAECWLQHWVSGVESDDSV LPSVAFGLSCAQAELKQTLPLSADYRKAPLCTGDPDELFAVLQALPGEKVAKVKVGLYEAVRDGMIVNVLLEALPDLTLR LDANRSWSRAKADGFAKYVNPALRSRIAFLEEPCKTRAESREFAQDTGIAIAWDESVREADFQVEAEPGVAAIVIKPTLV GSLARCQQLVQQAHQAGLVAVISSSIESSLGLTQLARLAAWLTPVTVPGLDTLDLMQAQVVRPWPDSPLPLITTEQLGVV WHR
Sequences:
>Translated_323_residues MRTATLYRYSVPMEAGVILRHQRLKSRDGLLVKLQQGELSGWGEIAPLPEFSQETLDQAQVAAECWLQHWVSGVESDDSV LPSVAFGLSCAQAELKQTLPLSADYRKAPLCTGDPDELFAVLQALPGEKVAKVKVGLYEAVRDGMIVNVLLEALPDLTLR LDANRSWSRAKADGFAKYVNPALRSRIAFLEEPCKTRAESREFAQDTGIAIAWDESVREADFQVEAEPGVAAIVIKPTLV GSLARCQQLVQQAHQAGLVAVISSSIESSLGLTQLARLAAWLTPVTVPGLDTLDLMQAQVVRPWPDSPLPLITTEQLGVV WHR >Mature_323_residues MRTATLYRYSVPMEAGVILRHQRLKSRDGLLVKLQQGELSGWGEIAPLPEFSQETLDQAQVAAECWLQHWVSGVESDDSV LPSVAFGLSCAQAELKQTLPLSADYRKAPLCTGDPDELFAVLQALPGEKVAKVKVGLYEAVRDGMIVNVLLEALPDLTLR LDANRSWSRAKADGFAKYVNPALRSRIAFLEEPCKTRAESREFAQDTGIAIAWDESVREADFQVEAEPGVAAIVIKPTLV GSLARCQQLVQQAHQAGLVAVISSSIESSLGLTQLARLAAWLTPVTVPGLDTLDLMQAQVVRPWPDSPLPLITTEQLGVV WHR
Specific function: Converts SHCHC to OSB [H]
COG id: COG1441
COG function: function code H; O-succinylbenzoate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788596, Length=317, Percent_Identity=66.2460567823344, Blast_Score=423, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 35298; Mature: 35298
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTATLYRYSVPMEAGVILRHQRLKSRDGLLVKLQQGELSGWGEIAPLPEFSQETLDQAQ CCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH VAAECWLQHWVSGVESDDSVLPSVAFGLSCAQAELKQTLPLSADYRKAPLCTGDPDELFA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH VLQALPGEKVAKVKVGLYEAVRDGMIVNVLLEALPDLTLRLDANRSWSRAKADGFAKYVN HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC PALRSRIAFLEEPCKTRAESREFAQDTGIAIAWDESVREADFQVEAEPGVAAIVIKPTLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCEEECCCCEEEEEECHHHH GSLARCQQLVQQAHQAGLVAVISSSIESSLGLTQLARLAAWLTPVTVPGLDTLDLMQAQV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VRPWPDSPLPLITTEQLGVVWHR CCCCCCCCCCEEEECCCCCEECC >Mature Secondary Structure MRTATLYRYSVPMEAGVILRHQRLKSRDGLLVKLQQGELSGWGEIAPLPEFSQETLDQAQ CCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH VAAECWLQHWVSGVESDDSVLPSVAFGLSCAQAELKQTLPLSADYRKAPLCTGDPDELFA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH VLQALPGEKVAKVKVGLYEAVRDGMIVNVLLEALPDLTLRLDANRSWSRAKADGFAKYVN HHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC PALRSRIAFLEEPCKTRAESREFAQDTGIAIAWDESVREADFQVEAEPGVAAIVIKPTLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHCCCEEECCCCEEEEEECHHHH GSLARCQQLVQQAHQAGLVAVISSSIESSLGLTQLARLAAWLTPVTVPGLDTLDLMQAQV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH VRPWPDSPLPLITTEQLGVVWHR CCCCCCCCCCEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA