Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811435

Identifier: 108811435

GI number: 108811435

Start: 1448444

End: 1448863

Strand: Reverse

Name: 108811435

Synonym: YPN_1272

Alternate gene names: NA

Gene position: 1448863-1448444 (Counterclockwise)

Preceding gene: 108811436

Following gene: 108811434

Centisome position: 31.95

GC content: 30.95

Gene sequence:

>420_bases
GTGAAGTGGATCAGGGTAATTGAGATGAAAAATAGACTTTTCAATGCACTACTTGGGGTTATGTTATTATTAATTATCAC
TCCCATGATGTTATTAGTAGGAAGTTACGTTATTTCACTAATGCGAATGGAAGACGAAATAACATTCTCTAGTTCTATTT
TCATATCTTTACTTTCATCTCCTCTCGTTTTTTATGCTCTCGCGGGTTCTACTTGTGAATTTATATTTAATAAATTACCA
AAATCTAGAAAAATAGTTATAAAATACTTAACAATGCTAGCCATCGCATCATTTATCATTAGTCTCCCCGTGTCTTTTTA
TGTTGATTACAAATTAAAAAGTAATAGTTATGTGGTATGTGACAGAATTTCATGGATGTCGCCGAATACTTATGTAAAAG
ACTTATCACTTTGTAGATAA

Upstream 100 bases:

>100_bases
TGTGACAAAATCTCATGGATGTCGCCGAATTTTTATGTAAGAGATTTATCACTTTGTAGATAAAAATAAAATATTTAACA
AGAAAATAATTTTAAATACA

Downstream 100 bases:

>100_bases
ATATAAAATATTTAACAGAAAAAGATAATTATAAATATAGTAAAGTGGCTCTGGGTAATTGAGATGAAAAATAGATTATT
TAAAACATTAGGCGGGTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP
KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR

Sequences:

>Translated_139_residues
MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP
KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR
>Mature_139_residues
MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSSPLVFYALAGSTCEFIFNKLP
KSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVCDRISWMSPNTYVKDLSLCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15975; Mature: 15975

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVFYALAGSTCEFIFNKLPKSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVC
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEE
DRISWMSPNTYVKDLSLCR
ECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKWIRVIEMKNRLFNALLGVMLLLIITPMMLLVGSYVISLMRMEDEITFSSSIFISLLSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLVFYALAGSTCEFIFNKLPKSRKIVIKYLTMLAIASFIISLPVSFYVDYKLKSNSYVVC
HHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCEEEE
DRISWMSPNTYVKDLSLCR
ECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA