Click here to switch to the map view.

The map label for this gene is 108811032

Identifier: 108811032

GI number: 108811032

Start: 1013652

End: 1015256

Strand: Reverse

Name: 108811032

Synonym: YPN_0867

Alternate gene names: NA

Gene position: 1015256-1013652 (Counterclockwise)

Preceding gene: 108811045

Following gene: 108811030

Centisome position: 22.39

GC content: 47.98

Gene sequence:

>1605_bases
ATGAAATTACATTTCAATGCACAACTACATCGAAAACCTATTTTGTGGAGCATGGGGGGAATATTAGCCTCACAGCTCCT
TGTTATGCTACCGGTCGATAAGGCAGAAGCGCACGGCGCGGTGGGTTTCCCTATCGCCCGGCAATATCAGTGCCAGCTAG
AAGCTGGATTCTGGGGAGACCCTGCGAATATTCCTAACTCAGATTGTCGACAAGCTATTGAGAACCCAGGCGATCCAAGC
AATCCACAACTGCCGTTTACACAATGGAATGAGCTTTCAGCAAACCCGACCAATCCAAGCATACAAGCCACTGTAGAACT
CGCCGTTCCCAATGGTTTACTCTGTGCGGGAGGTGATCCACGTAAAGCCGGTCTCGACAATGTCCCTGCCACAAAATGGC
GAAAAACACTTATTACCCCAGATGAAAATGGCCACATGCAGCTTCGTTGGGAAAATACAACGGCCCATAACCCTGCCTAT
ATGAAGGTTTATATTACTAAACCAAGCTACGACTCGACCAAAGCACTACGTTGGGAAGATCTTGAGCTACTTTATGCAGA
TAAAGCTCCTACCCCAACGGCTGGGACCGGGCTATCTCCAAGTACCAATAGTTTTTATTTTCTGAATGTTCCGTTAAACG
GCCACACTGGGGATGCCATCATTTACAGTTACTGGCAACGTGAGGACGCGGGCAACGAAGGCTTCTTCAACTGCAGCGAT
GTCAACATCAGCGAAGGGAGCACACCAAGCTTCCCATGGGTAAATAACAGCCAATTTATCGTACAAGGTTTCACGCCAGC
CATTAATGACCAAATTCGTTTCCGTGTGATGGGAGGGAGCGCTAAAGGTGTGGAAGTTGTGGATGTTTATCTTCCGATCA
CCGCACAGAATCAGGCACAAACAGTCTGGTCAAAACAACTGGCTGATAAACTGAATAATACCTACCCACAATATGTCAGG
ATCGGCGTACGCTCTGGCAATGATATTGTCTACAATACGGCTAATATTGCAACAAACATTGTGTGGCTACAAACAGGCTT
CAGTAGCGCGATGAGTCTCATCAGTGGAACTCCTGAACCTGAACAGCCACAGCCGCCAGTAGCGCAGATTACCGCGCCAA
GTAGTGTACAAGATAATGAAACGATCACGCTTTCTGCCAGCGCATCTACAGGGCAGATAGCGAGCTACCAATGGGAGTTC
CAGCACTTTGAACCAAAAGTTGCGACAACTCAAAATGTCACTGTAAGGGCTGTCGCTACTCAGCAACCTTTAGCCGGAAA
AGTGACACTAACCGTCACCAACAATCAAGGCGTACAAAGCAGAGCTGAAAAAACTATCAATATCTTGCCATCAGGCGGAA
TTGAACAAGAGCACCCACTGTGGGACCGTAACAAGGTTACGACTTATGGAGAAGGCACAACAGTAATAGGTTTGGATGGC
CAAGCCTGGACCTGTAAGCCGTTCCCATTCACCGGCTGGTGTGCTCAAACTATACCAGATTATATACAGAGCAATAACTG
GCCATACGCTCCAGGAAGTGCCGCTGCCGCTACGTTGTCAGAAGATTCTCGTCCATGGTTGCGGACAGTAAGAACACATC
ACTAA

Upstream 100 bases:

>100_bases
CCGGGCGGGAGGGATGCGCAATATAAAAATCACCAAAATACAATTCAACAGATTAATTGTATTACCATCCATTAAATAAA
TATCGTAAAAGGATAATAAA

Downstream 100 bases:

>100_bases
TCGTCTCTATCAGCGGGTATTATTCTATAATACCCGTTTTTTAATTCAGAAATAGAATGCTAAAAGTCAAAAATACTTCC
ATCCCTTAACATCCTAACGT

Product: carbohydrate-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPIARQYQCQLEAGFWGDPANIPNSDCRQAIENPGDPS
NPQLPFTQWNELSANPTNPSIQATVELAVPNGLLCAGGDPRKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAY
MKVYITKPSYDSTKALRWEDLELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIYSYWQREDAGNEGFFNCSD
VNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSAKGVEVVDVYLPITAQNQAQTVWSKQLADKLNNTYPQYVR
IGVRSGNDIVYNTANIATNIVWLQTGFSSAMSLISGTPEPEQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWEF
QHFEPKVATTQNVTVRAVATQQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEHPLWDRNKVTTYGEGTTVIGLDG
QAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAATLSEDSRPWLRTVRTHH

Sequences:

>Translated_534_residues
MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPIARQYQCQLEAGFWGDPANIPNSDCRQAIENPGDPS
NPQLPFTQWNELSANPTNPSIQATVELAVPNGLLCAGGDPRKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAY
MKVYITKPSYDSTKALRWEDLELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIYSYWQREDAGNEGFFNCSD
VNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSAKGVEVVDVYLPITAQNQAQTVWSKQLADKLNNTYPQYVR
IGVRSGNDIVYNTANIATNIVWLQTGFSSAMSLISGTPEPEQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWEF
QHFEPKVATTQNVTVRAVATQQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEHPLWDRNKVTTYGEGTTVIGLDG
QAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAATLSEDSRPWLRTVRTHH
>Mature_534_residues
MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPIARQYQCQLEAGFWGDPANIPNSDCRQAIENPGDPS
NPQLPFTQWNELSANPTNPSIQATVELAVPNGLLCAGGDPRKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAY
MKVYITKPSYDSTKALRWEDLELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIYSYWQREDAGNEGFFNCSD
VNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSAKGVEVVDVYLPITAQNQAQTVWSKQLADKLNNTYPQYVR
IGVRSGNDIVYNTANIATNIVWLQTGFSSAMSLISGTPEPEQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWEF
QHFEPKVATTQNVTVRAVATQQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEHPLWDRNKVTTYGEGTTVIGLDG
QAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAATLSEDSRPWLRTVRTHH

Specific function: Unknown

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58545; Mature: 58545

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPIARQYQCQLEAGFWGD
CEEEECCCCCCCCCEEHHHHHHHHCEEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCC
PANIPNSDCRQAIENPGDPSNPQLPFTQWNELSANPTNPSIQATVELAVPNGLLCAGGDP
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC
RKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAYMKVYITKPSYDSTKALRWED
CCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEECC
LELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIYSYWQREDAGNEGFFNCSD
EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECC
VNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSAKGVEVVDVYLPITAQNQAQ
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHH
TVWSKQLADKLNNTYPQYVRIGVRSGNDIVYNTANIATNIVWLQTGFSSAMSLISGTPEP
HHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEHHHEEEEEEEECCHHHHHHHHCCCCCC
EQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWEFQHFEPKVATTQNVTVRAVAT
CCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEECCCCEEEEEEEC
QQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEHPLWDRNKVTTYGEGTTVIGLDG
CCCCCCEEEEEEECCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECC
QAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAATLSEDSRPWLRTVRTHH
CEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKLHFNAQLHRKPILWSMGGILASQLLVMLPVDKAEAHGAVGFPIARQYQCQLEAGFWGD
CEEEECCCCCCCCCEEHHHHHHHHCEEEEEECCHHHCCCCCCCCCCCEEEEEEECCCCCC
PANIPNSDCRQAIENPGDPSNPQLPFTQWNELSANPTNPSIQATVELAVPNGLLCAGGDP
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCC
RKAGLDNVPATKWRKTLITPDENGHMQLRWENTTAHNPAYMKVYITKPSYDSTKALRWED
CCCCCCCCCCCHHHEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEECC
LELLYADKAPTPTAGTGLSPSTNSFYFLNVPLNGHTGDAIIYSYWQREDAGNEGFFNCSD
EEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEECC
VNISEGSTPSFPWVNNSQFIVQGFTPAINDQIRFRVMGGSAKGVEVVDVYLPITAQNQAQ
CCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEEEEECCCHHH
TVWSKQLADKLNNTYPQYVRIGVRSGNDIVYNTANIATNIVWLQTGFSSAMSLISGTPEP
HHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEEHHHEEEEEEEECCHHHHHHHHCCCCCC
EQPQPPVAQITAPSSVQDNETITLSASASTGQIASYQWEFQHFEPKVATTQNVTVRAVAT
CCCCCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEECCCCEEEEEEEC
QQPLAGKVTLTVTNNQGVQSRAEKTINILPSGGIEQEHPLWDRNKVTTYGEGTTVIGLDG
CCCCCCEEEEEEECCCCCHHHHCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEEECC
QAWTCKPFPFTGWCAQTIPDYIQSNNWPYAPGSAAAATLSEDSRPWLRTVRTHH
CEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA