| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108798013
Identifier: 108798013
GI number: 108798013
Start: 1136859
End: 1138640
Strand: Direct
Name: 108798013
Synonym: Mmcs_1040
Alternate gene names: NA
Gene position: 1136859-1138640 (Clockwise)
Preceding gene: 108798012
Following gene: 108798015
Centisome position: 19.93
GC content: 69.92
Gene sequence:
>1782_bases GTGTCAGACCCGTCTGCCAGAATTGAAGACATGTTCGATGGTTCGTTGCCCGGGATCGGCGACTTCTCCGCGCTCAGTGA CGCGGAGTTGGTGGCCGCCTCGGCCGGCTGGGGACGCGCCGAAAACGCGGCCGCCGCCCGCAAACTGGCCGCCATGGCCG AACTGTTCCGCCGCCGCACCGGCTGCGACACCGCCACCGACCGCCACAACTGGTTCGTCGACCCCGACGCCAACGCCGTC AGCGAACTGGCCGCCGCCCACAACATCACCGAACGCCTGGCCATGTTCCAAACCCACCGCGCCGTCGCCCTCGCCGACCG ACTCCCCCACGTCGCCGCCCTGTTCACCGCCGGACTGATCACCGACCTGCTGGTCCGCGCGATCGTGACCCGCACCGCCC TCATCACCGACCCCACCCTGATGGCCGCCGTCGACACCGACCTCGCCGCCCAGATCACCAACTGGGGACCCCAATCAGAA AAGAAAACCCTCGCCGCCATCGACACCATCGTCGAAACCCACGACCCCGGCGCGCTACGGCGGGTCAAAGACGCCGAACA CGACCGCGGCCTGCAATTCGGCTTCATCAGCGACGCCGCCGGCTTCATGACCGTCTGGGCCCGCATGTACGCCCCCGACG GCGCCGCCTTCGAACAACGCGTCACCGACATGGCCCACACCGTGTGCGACGAGGACCCCCGCACCGCCGACGAACGCCGC AACGACGCCCTGGCCGCCGTCGCCACCGGCACCCACCTACGCTGCGAATGCCCCAACCCCGACTGCCCCGGCAACCGCGA CACACAACCCACCAAAGACGTCGTCGTCCACATCGTCACCACCGAAGAAACACTCGACGCCGCCCGCACCCAAACCGAAG CCGAAACGCAGCCCGCCCCCGAAGCGACACCCGAGCAGGGAGCTCAGCCGACGTCCGAACCCGCGCCCGAGCCGGAGCCC GAAGACGAGGCGCAACCCGAGCCCGAGGCGGAACCGCACGCGGAGACTGAGCCAGAGCCGGAGGCCGAAGCGGGGCCGAC CCCCGAGGCGGGGGTGGAAGCTGATCCCGAGGCGGAAGCTGATCCCAAGGCGGAGCCGGAAGCGGAGGCGGGGCCGACCC CCGAAGCGGAGGCGGAAGCGGCGGTCACGCCCACCCCGCGGCAGTCAGCCTGCCCGGCACCGGCATTCGTCATCGGCGCC GGAGTCACCAACCCCACCGTGCTCGCCGCCTTCCTCCACCGCGCCCGCCTCCGCACCATCCAGCACCCCGGCAACGCGCC ACCCGAACCCCACTACCGACCCTCGGCAGCGCTGCAGGACTTCGTGCGCTGCCGCGACCTGACCTGCCGCTTCCCCGGCT GCGACGCCCCGGCCACCCGCTGCGACATCGACCACACCGCGCCCTGGCCGGCAGGACCGACCTGCGCCGCCAACCTCAAA TGCCTGTGCCGAAAACACCACCTGCTCAAAACCTTCTGGACCGGTGAGGATGGTTGGCGCGACGAACAGTTCGCCGACGG CACCATCGTGTGGACCTCCCCGAGCGGGCAGACCTACACCACCCGCCCCGGCAGCGCGCTGCTGTTCCCGACCCTGTGCA CCCCCACCGCCGACGCGCCGATCCAACCCACCAAAGACACCAAAGACACCACCACCGACCGCGGCCTCAAAATGCCCAAA CGCCGCCGCACCCGCGCCCAAAACCGCGCCCGCCGCATCCAACAAGAACGCCGACTCAATGACGACCTCGTCGCCGAACG CAACAAACCCCCACCGTTCTGA
Upstream 100 bases:
>100_bases GACTTCGCCGAGTGCCTTCGCGCGCGCTTCGGTCTGAGTTCTGGACGGGGTTGTCCCCAGCGGCGAATTCATCCACAGGC GTGGGGTTTTCGAGGGTTGC
Downstream 100 bases:
>100_bases GGCAGGGCCACCTCAAGCGAGTTGCGGAAGCACCTCGGCGGCAAGCCGTTCCATCTGCTCGCGGTCTTCTGCGACCGTGG CGCCGACGGGGTTGCACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MSDPSARIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAAAARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAV SELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITNWGPQSE KKTLAAIDTIVETHDPGALRRVKDAEHDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR NDALAAVATGTHLRCECPNPDCPGNRDTQPTKDVVVHIVTTEETLDAARTQTEAETQPAPEATPEQGAQPTSEPAPEPEP EDEAQPEPEAEPHAETEPEPEAEAGPTPEAGVEADPEAEADPKAEPEAEAGPTPEAEAEAAVTPTPRQSACPAPAFVIGA GVTNPTVLAAFLHRARLRTIQHPGNAPPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLK CLCRKHHLLKTFWTGEDGWRDEQFADGTIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTKDTTTDRGLKMPK RRRTRAQNRARRIQQERRLNDDLVAERNKPPPF
Sequences:
>Translated_593_residues MSDPSARIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAAAARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAV SELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITNWGPQSE KKTLAAIDTIVETHDPGALRRVKDAEHDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR NDALAAVATGTHLRCECPNPDCPGNRDTQPTKDVVVHIVTTEETLDAARTQTEAETQPAPEATPEQGAQPTSEPAPEPEP EDEAQPEPEAEPHAETEPEPEAEAGPTPEAGVEADPEAEADPKAEPEAEAGPTPEAEAEAAVTPTPRQSACPAPAFVIGA GVTNPTVLAAFLHRARLRTIQHPGNAPPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLK CLCRKHHLLKTFWTGEDGWRDEQFADGTIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTKDTTTDRGLKMPK RRRTRAQNRARRIQQERRLNDDLVAERNKPPPF >Mature_592_residues SDPSARIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAAAARKLAAMAELFRRRTGCDTATDRHNWFVDPDANAVS ELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLITDLLVRAIVTRTALITDPTLMAAVDTDLAAQITNWGPQSEK KTLAAIDTIVETHDPGALRRVKDAEHDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERRN DALAAVATGTHLRCECPNPDCPGNRDTQPTKDVVVHIVTTEETLDAARTQTEAETQPAPEATPEQGAQPTSEPAPEPEPE DEAQPEPEAEPHAETEPEPEAEAGPTPEAGVEADPEAEADPKAEPEAEAGPTPEAEAEAAVTPTPRQSACPAPAFVIGAG VTNPTVLAAFLHRARLRTIQHPGNAPPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLKC LCRKHHLLKTFWTGEDGWRDEQFADGTIVWTSPSGQTYTTRPGSALLFPTLCTPTADAPIQPTKDTKDTTTDRGLKMPKR RRTRAQNRARRIQQERRLNDDLVAERNKPPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 64125; Mature: 63993
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSARIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAAAARKLAAMAELFRRRT CCCCHHHHHHHHCCCCCCCCCHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GCDTATDRHNWFVDPDANAVSELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLI CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH TDLLVRAIVTRTALITDPTLMAAVDTDLAAQITNWGPQSEKKTLAAIDTIVETHDPGALR HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH RVKDAEHDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH NDALAAVATGTHLRCECPNPDCPGNRDTQPTKDVVVHIVTTEETLDAARTQTEAETQPAP CCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCC EATPEQGAQPTSEPAPEPEPEDEAQPEPEAEPHAETEPEPEAEAGPTPEAGVEADPEAEA CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPKAEPEAEAGPTPEAEAEAAVTPTPRQSACPAPAFVIGAGVTNPTVLAAFLHRARLRTI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH QHPGNAPPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLK CCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH CLCRKHHLLKTFWTGEDGWRDEQFADGTIVWTSPSGQTYTTRPGSALLFPTLCTPTADAP HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC IQPTKDTKDTTTDRGLKMPKRRRTRAQNRARRIQQERRLNDDLVAERNKPPPF CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure SDPSARIEDMFDGSLPGIGDFSALSDAELVAASAGWGRAENAAAARKLAAMAELFRRRT CCCHHHHHHHHCCCCCCCCCHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHC GCDTATDRHNWFVDPDANAVSELAAAHNITERLAMFQTHRAVALADRLPHVAALFTAGLI CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH TDLLVRAIVTRTALITDPTLMAAVDTDLAAQITNWGPQSEKKTLAAIDTIVETHDPGALR HHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHH RVKDAEHDRGLQFGFISDAAGFMTVWARMYAPDGAAFEQRVTDMAHTVCDEDPRTADERR HHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH NDALAAVATGTHLRCECPNPDCPGNRDTQPTKDVVVHIVTTEETLDAARTQTEAETQPAP CCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCC EATPEQGAQPTSEPAPEPEPEDEAQPEPEAEPHAETEPEPEAEAGPTPEAGVEADPEAEA CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DPKAEPEAEAGPTPEAEAEAAVTPTPRQSACPAPAFVIGAGVTNPTVLAAFLHRARLRTI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHH QHPGNAPPEPHYRPSAALQDFVRCRDLTCRFPGCDAPATRCDIDHTAPWPAGPTCAANLK CCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH CLCRKHHLLKTFWTGEDGWRDEQFADGTIVWTSPSGQTYTTRPGSALLFPTLCTPTADAP HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEEECCCCCCCC IQPTKDTKDTTTDRGLKMPKRRRTRAQNRARRIQQERRLNDDLVAERNKPPPF CCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]