| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797855
Identifier: 108797855
GI number: 108797855
Start: 974132
End: 974920
Strand: Reverse
Name: 108797855
Synonym: Mmcs_0880
Alternate gene names: NA
Gene position: 974920-974132 (Counterclockwise)
Preceding gene: 108797864
Following gene: 108797854
Centisome position: 17.09
GC content: 70.34
Gene sequence:
>789_bases ATGACTTGTAAGCGCACCGCAGCCGCCGCCCGTTCGAACGCTCCGTCGGTGTCCGCGTGGCGGTGGGTGGCCGCGGTCTT GGCGGTCAGCCAGTTGGTCGCCTCGCCGGTGTCGCGCGCCCTGAACGGCGAATTCCTGAAGTCGGGCGCGACGAACCAGG CCTTGCTCACGCCCGCGGGCTACGCGTTCACCCTGTGGGGGTTGATCACCGTGTTGAGCGCCGTGACCGCGGCATGCATC GCGCGGGTGGGGCTGGGCTCGCCGTGGGAGACCGACGCGCTGATCGATGCGAGCGTCGTGTTCGTCGGGTTCAGCGTGTG GTTGGCCGTGGCGGCGCAGGACTGGTTGTGGGCGAGTGTGGTGGTGTTCCTCGTGATGGCCGCGGCGCTGTCGCACATCA TGTGGCTGCTGGTGCGCCGCCGCCGGGAGCTGACGTGTCCGCGGTGGTTGGCGGTGCTGGCGACGGTGTCGTTCGGGCTC TATCTCGGGTGGAGCAGCATCGCGGTGTTCGCGAACGTGGCGGCGGCGCTGATCGCCACGGGGTGGTCGTCGTCGGCGGT GGTGTGGCAGTTCGTGGTGCTGGCCGCCGCGTCGGTGGCCGCACTCGTGGCGACCGTGTTGTTGCGGGGGACGCCCGGGT TCGTGGCGGGTGTGCTGTGGGCGTTGGTCGCGATCGCGATCGGGGCGTCGCAGCGGCAGAGCACTCTTTTGTCGGTCACC GCGGTGGTCGCGGCGGTGGCCGTCGGTGTGGTCGCCGTCGTGCAGCAGGTGCGGTCCAGGGCTCGATAA
Upstream 100 bases:
>100_bases CCTTTCGTTGTGGTGGCGGACACAATTTAAACTGATCGTGATCGCAATCACAACCACATGCGGAAACGCGCGTTGTCATC CGAGCGCGGAGCGGGAACGA
Downstream 100 bases:
>100_bases TCAGCCATTGAGCTGGGCCGATGCGATGTGGGAGCATCTGCGCATGAACCCGCAGGACGACCCCGAGGCCCGGATTCGCG ACCTCGAACGCCCGTTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTCKRTAAAARSNAPSVSAWRWVAAVLAVSQLVASPVSRALNGEFLKSGATNQALLTPAGYAFTLWGLITVLSAVTAACI ARVGLGSPWETDALIDASVVFVGFSVWLAVAAQDWLWASVVVFLVMAAALSHIMWLLVRRRRELTCPRWLAVLATVSFGL YLGWSSIAVFANVAAALIATGWSSSAVVWQFVVLAAASVAALVATVLLRGTPGFVAGVLWALVAIAIGASQRQSTLLSVT AVVAAVAVGVVAVVQQVRSRAR
Sequences:
>Translated_262_residues MTCKRTAAAARSNAPSVSAWRWVAAVLAVSQLVASPVSRALNGEFLKSGATNQALLTPAGYAFTLWGLITVLSAVTAACI ARVGLGSPWETDALIDASVVFVGFSVWLAVAAQDWLWASVVVFLVMAAALSHIMWLLVRRRRELTCPRWLAVLATVSFGL YLGWSSIAVFANVAAALIATGWSSSAVVWQFVVLAAASVAALVATVLLRGTPGFVAGVLWALVAIAIGASQRQSTLLSVT AVVAAVAVGVVAVVQQVRSRAR >Mature_261_residues TCKRTAAAARSNAPSVSAWRWVAAVLAVSQLVASPVSRALNGEFLKSGATNQALLTPAGYAFTLWGLITVLSAVTAACIA RVGLGSPWETDALIDASVVFVGFSVWLAVAAQDWLWASVVVFLVMAAALSHIMWLLVRRRRELTCPRWLAVLATVSFGLY LGWSSIAVFANVAAALIATGWSSSAVVWQFVVLAAASVAALVATVLLRGTPGFVAGVLWALVAIAIGASQRQSTLLSVTA VVAAVAVGVVAVVQQVRSRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27302; Mature: 27171
Theoretical pI: Translated: 11.93; Mature: 11.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKRTAAAARSNAPSVSAWRWVAAVLAVSQLVASPVSRALNGEFLKSGATNQALLTPAG CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCC YAFTLWGLITVLSAVTAACIARVGLGSPWETDALIDASVVFVGFSVWLAVAAQDWLWASV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFLVMAAALSHIMWLLVRRRRELTCPRWLAVLATVSFGLYLGWSSIAVFANVAAALIAT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWSSSAVVWQFVVLAAASVAALVATVLLRGTPGFVAGVLWALVAIAIGASQRQSTLLSVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVVAAVAVGVVAVVQQVRSRAR HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TCKRTAAAARSNAPSVSAWRWVAAVLAVSQLVASPVSRALNGEFLKSGATNQALLTPAG CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCC YAFTLWGLITVLSAVTAACIARVGLGSPWETDALIDASVVFVGFSVWLAVAAQDWLWASV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVFLVMAAALSHIMWLLVRRRRELTCPRWLAVLATVSFGLYLGWSSIAVFANVAAALIAT HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GWSSSAVVWQFVVLAAASVAALVATVLLRGTPGFVAGVLWALVAIAIGASQRQSTLLSVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH AVVAAVAVGVVAVVQQVRSRAR HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA