| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797854
Identifier: 108797854
GI number: 108797854
Start: 973405
End: 974106
Strand: Reverse
Name: 108797854
Synonym: Mmcs_0879
Alternate gene names: NA
Gene position: 974106-973405 (Counterclockwise)
Preceding gene: 108797855
Following gene: 108797853
Centisome position: 17.07
GC content: 69.8
Gene sequence:
>702_bases ATGTGGGAGCATCTGCGCATGAACCCGCAGGACGACCCCGAGGCCCGGATTCGCGACCTCGAACGCCCGTTGGCCGACCG GGCGCAGACGTCCGAGTTGGGCACCCAGCCGTACACGGTCGCGGGGGCGTATCCACCGCCGGTGTACGACACGCCGTATC CGACTGCGCCGCAACCTTATTCGAAGGGTCCGTCGCAGACCGGCGTGGTCGTGCTGGTCGTCGTCGTGCTGGGTTTGCTG GTTTTCGGTGTGGGCGTGGCGATCTACTTCGCCAAGGCCGGGCCGCGCGACGGTGCGGTCACCGCGGGCCGGCCGACGAT CGCGGGCGGTGGCGGGGCGCTCGACGAGACACCGGAAGCGCCGGCCACCGGTGATCTGCCGATCGTGATCCTGCCGGGTG GCCCGTCGGGCGGCGGCGGTGCGGTCGCCCAGGCACCGCCGGGTGGGCAGTTCAGCGTGTCGGGGGTGGAGGGCGACAAG CGAGTGGCCTGTGACGACAGCCTGATCAGCGTGAGCGGCGTGTCGAACACGGTGACGATCACGGGGCATTGCGTGAGCGT GACGGTGTCGGGGGTGGGCAACGAGGTGATCGTGGAGAGCGCCGACCGCATCAGCGCGTCGGGTTTCGAGAACCGCGTGA CGTTCCAGACCGGTGACCCGCAGATCGACAGCTTCGGCGACAACGTCGTCGAGCGCGGCTGA
Upstream 100 bases:
>100_bases GTCACCGCGGTGGTCGCGGCGGTGGCCGTCGGTGTGGTCGCCGTCGTGCAGCAGGTGCGGTCCAGGGCTCGATAATCAGC CATTGAGCTGGGCCGATGCG
Downstream 100 bases:
>100_bases ACCCCTCCCGTAACACCTGCGACGTAGATCACGATCACACCGTCAGCACCATCAATCCCGTTGGTCGCAGGAGTCGGGAG AGTGTATGCGGAGAACCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MWEHLRMNPQDDPEARIRDLERPLADRAQTSELGTQPYTVAGAYPPPVYDTPYPTAPQPYSKGPSQTGVVVLVVVVLGLL VFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDETPEAPATGDLPIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDK RVACDDSLISVSGVSNTVTITGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQIDSFGDNVVERG
Sequences:
>Translated_233_residues MWEHLRMNPQDDPEARIRDLERPLADRAQTSELGTQPYTVAGAYPPPVYDTPYPTAPQPYSKGPSQTGVVVLVVVVLGLL VFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDETPEAPATGDLPIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDK RVACDDSLISVSGVSNTVTITGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQIDSFGDNVVERG >Mature_233_residues MWEHLRMNPQDDPEARIRDLERPLADRAQTSELGTQPYTVAGAYPPPVYDTPYPTAPQPYSKGPSQTGVVVLVVVVLGLL VFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDETPEAPATGDLPIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDK RVACDDSLISVSGVSNTVTITGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQIDSFGDNVVERG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23769; Mature: 23769
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEHLRMNPQDDPEARIRDLERPLADRAQTSELGTQPYTVAGAYPPPVYDTPYPTAPQPY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC SKGPSQTGVVVLVVVVLGLLVFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDETPEA CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEECCCCCCCCCCCC PATGDLPIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDKRVACDDSLISVSGVSNTVTI CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCEEEEECCCCEEEE TGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQIDSFGDNVVERG EEEEEEEEECCCCCEEEEECCCHHCCCCCCCEEEEECCCCCCCCCCCHHHCCC >Mature Secondary Structure MWEHLRMNPQDDPEARIRDLERPLADRAQTSELGTQPYTVAGAYPPPVYDTPYPTAPQPY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC SKGPSQTGVVVLVVVVLGLLVFGVGVAIYFAKAGPRDGAVTAGRPTIAGGGGALDETPEA CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCEEECCCCCCCCCCCC PATGDLPIVILPGGPSGGGGAVAQAPPGGQFSVSGVEGDKRVACDDSLISVSGVSNTVTI CCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCEEEEECCCCEEEE TGHCVSVTVSGVGNEVIVESADRISASGFENRVTFQTGDPQIDSFGDNVVERG EEEEEEEEECCCCCEEEEECCCHHCCCCCCCEEEEECCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA