| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797853
Identifier: 108797853
GI number: 108797853
Start: 972738
End: 973319
Strand: Reverse
Name: 108797853
Synonym: Mmcs_0878
Alternate gene names: NA
Gene position: 973319-972738 (Counterclockwise)
Preceding gene: 108797854
Following gene: 108797852
Centisome position: 17.06
GC content: 70.1
Gene sequence:
>582_bases ATGCGGAGAACCTGGAGAACCGCCGTGGCAGCCGTCGCCCTCGCGGCGGCCGCCCTCGTCGCCGACGTCTCGCCCCCGGT CGCGTCCGCGCAACCCGCCGCCGCCGCGGTCAAGGACTTCTCGAAGCCGGCCATCGTGATCCTCGGCTACGGCCTCGAAC CCAACGGCACCATGCGCCCGATCCTGCGTCGCCGCGTCATCACCGGCCTGACGGTCGCGCAGTTCTTCCCGCAGTCGCCG ATCATCGTCACCGGCGGCAACCCCCGCAACGGCGTGAGCGAGGCCGCGGCGATGCGGCGCATGCTGCTCGTGCTCGGCTT CCCCGATCACCGAATCATCGTGGAGGACAAGGCGAACAGCACCGTACAGAACGCGCGGTTCTCCGTGCCGCTGGCCGAGA AGGCGGGCACGTCGGGGATCATCCTGGTCACCTCGTCGACGCATCAGGACCGGGCCGACGGCAACTTCGTCGACGCCGGG GCGAACCTGCTGGCGACGGTGAGCTACCCCGACGGCAGTCCCCAGGTGAACGCCGCGCAGTTCGCGCGCGACGTCATCAG CCCACTGGTCAACCAAGGCTGA
Upstream 100 bases:
>100_bases GTCGAGCGCGGCTGAACCCCTCCCGTAACACCTGCGACGTAGATCACGATCACACCGTCAGCACCATCAATCCCGTTGGT CGCAGGAGTCGGGAGAGTGT
Downstream 100 bases:
>100_bases CGCGCCCCAGGTTTCACCGGACACTACGAGGGGTACTGTCCGGTGCCATCCTTCCGCAACGTCGCAACCGGGGGTCCGAT GAGAGTTCTGGTCACAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MRRTWRTAVAAVALAAAALVADVSPPVASAQPAAAAVKDFSKPAIVILGYGLEPNGTMRPILRRRVITGLTVAQFFPQSP IIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAG ANLLATVSYPDGSPQVNAAQFARDVISPLVNQG
Sequences:
>Translated_193_residues MRRTWRTAVAAVALAAAALVADVSPPVASAQPAAAAVKDFSKPAIVILGYGLEPNGTMRPILRRRVITGLTVAQFFPQSP IIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAG ANLLATVSYPDGSPQVNAAQFARDVISPLVNQG >Mature_193_residues MRRTWRTAVAAVALAAAALVADVSPPVASAQPAAAAVKDFSKPAIVILGYGLEPNGTMRPILRRRVITGLTVAQFFPQSP IIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANSTVQNARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAG ANLLATVSYPDGSPQVNAAQFARDVISPLVNQG
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20180; Mature: 20180
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTWRTAVAAVALAAAALVADVSPPVASAQPAAAAVKDFSKPAIVILGYGLEPNGTMRP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHH ILRRRVITGLTVAQFFPQSPIIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANS HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCEEEEECCCCC TVQNARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAGANLLATVSYPDGSPQVNAAQ CHHHCEECCCCHHHCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHH FARDVISPLVNQG HHHHHHHHHHCCC >Mature Secondary Structure MRRTWRTAVAAVALAAAALVADVSPPVASAQPAAAAVKDFSKPAIVILGYGLEPNGTMRP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHH ILRRRVITGLTVAQFFPQSPIIVTGGNPRNGVSEAAAMRRMLLVLGFPDHRIIVEDKANS HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHEECCCCCEEEEECCCCC TVQNARFSVPLAEKAGTSGIILVTSSTHQDRADGNFVDAGANLLATVSYPDGSPQVNAAQ CHHHCEECCCCHHHCCCCCEEEEECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCHHH FARDVISPLVNQG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA