Click here to switch to the map view.

The map label for this gene is 108797627

Identifier: 108797627

GI number: 108797627

Start: 708612

End: 709484

Strand: Reverse

Name: 108797627

Synonym: Mmcs_0647

Alternate gene names: NA

Gene position: 709484-708612 (Counterclockwise)

Preceding gene: 108797628

Following gene: 108797620

Centisome position: 12.44

GC content: 67.81

Gene sequence:

>873_bases
GTGACTGATCCCTGGGCCCGTCCGGCCGACCAGCAGCCAGTCCCGCCTCCCCCGCCGTTCCCGCAGGGTGCGCCGCCGTC
GGCGCCCGGCCCGGGAGCGGAACCACCGAAGGAACGCGGCTCTCTCCTGGCCAAGGTCAAGGACATGTTCAGCGATCCGC
TGTCCATCGTGCTGGCCGTGGTCATCGTGGTGGCGCTCACCGCGGCCGGCCTGCTCGGTGGGGAGTTGTACGCCCGCAAC
CGGGCCGACGACGTGGTCTCCCGCGTCGTGTCCTGCGTCGTCGAGGACGAGGCCACCGCATCGTTCGGTGCGATGCCGCC
GTTCCTGCTGCAGCACATGACCGGCCACTACACGAACATCGACATCGAGACCGCGGGTAACCAGATCCGCGACGCCAAGG
GTATGAAGGTCGGCATCGACATCCAGGACGTCCGGCTCGAGGACACCGCGAACTCCAGCGGCACCATCGGATCGCTGGCC
GCGAACATCACCTGGTCGTCCGAGGGCATCACCCAGACCGTCCAGGATGCGATCCCGCTGTTCGGCAGCTTCCTGAACGG
GGTGAGCACCAACCCGTCGGCGGGCACCATCGAACTCGAGGGCGCGCTCGGCAGCATCGTCGCCAAACCGCAGGTCAGCA
ATGGTGGCATCACCCTGCAGGTGCAGCAGCTCTCCGGGCTCGGGTTCACCCTGCCCCGCGAAGCCGTGCAGCCCGCGCTC
GACGCCTTCACCTCGGGGTTGACCCAGAACTACCCGATGGACATCAAGGCGCAGAGCGTCGAGGTCACCGACACCGGCGT
GACGGCATTGTTCTCGACGCAGAACGCCGAGATCCCGAAGAGCGGCGAGGACCCCTGCTTCAACGGGCTCTGA

Upstream 100 bases:

>100_bases
CCGACCTCGACCTCGACGCGGCGCGCGAGGTGCGCGAGACCATTGCGGTGCTGAACAACCGCGCGGAGGTCGACTCACCC
GGTAGGGCAGAATCGCGGGC

Downstream 100 bases:

>100_bases
GCCCGGTTCAGTCCAGATCGTCGAGTACGGCGCGGGTGGCCGACAGACCCAACCGGGTCGCCCCCGCGTCGAGCATCGCG
ATCGCGTCGGCGGCGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTDPWARPADQQPVPPPPPFPQGAPPSAPGPGAEPPKERGSLLAKVKDMFSDPLSIVLAVVIVVALTAAGLLGGELYARN
RADDVVSRVVSCVVEDEATASFGAMPPFLLQHMTGHYTNIDIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLA
ANITWSSEGITQTVQDAIPLFGSFLNGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFTLPREAVQPAL
DAFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL

Sequences:

>Translated_290_residues
MTDPWARPADQQPVPPPPPFPQGAPPSAPGPGAEPPKERGSLLAKVKDMFSDPLSIVLAVVIVVALTAAGLLGGELYARN
RADDVVSRVVSCVVEDEATASFGAMPPFLLQHMTGHYTNIDIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLA
ANITWSSEGITQTVQDAIPLFGSFLNGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFTLPREAVQPAL
DAFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL
>Mature_289_residues
TDPWARPADQQPVPPPPPFPQGAPPSAPGPGAEPPKERGSLLAKVKDMFSDPLSIVLAVVIVVALTAAGLLGGELYARNR
ADDVVSRVVSCVVEDEATASFGAMPPFLLQHMTGHYTNIDIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLAA
NITWSSEGITQTVQDAIPLFGSFLNGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFTLPREAVQPALD
AFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30163; Mature: 30032

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPWARPADQQPVPPPPPFPQGAPPSAPGPGAEPPKERGSLLAKVKDMFSDPLSIVLAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VIVVALTAAGLLGGELYARNRADDVVSRVVSCVVEDEATASFGAMPPFLLQHMTGHYTNI
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCCEEE
DIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLAANITWSSEGITQTVQDAIPL
EEECCCCHHHHCCCCEECCEEEEEEEECCCCCCCCEEHEEEEEEECCCCHHHHHHHHHHH
FGSFLNGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFTLPREAVQPAL
HHHHHCCCCCCCCCCEEEECCCCCHHEECCEECCCCEEEEEEECCCCCCCCCHHHHHHHH
DAFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL
HHHHHHCCCCCCCCEEECEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDPWARPADQQPVPPPPPFPQGAPPSAPGPGAEPPKERGSLLAKVKDMFSDPLSIVLAV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
VIVVALTAAGLLGGELYARNRADDVVSRVVSCVVEDEATASFGAMPPFLLQHMTGHYTNI
HHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHCCCCEEE
DIETAGNQIRDAKGMKVGIDIQDVRLEDTANSSGTIGSLAANITWSSEGITQTVQDAIPL
EEECCCCHHHHCCCCEECCEEEEEEEECCCCCCCCEEHEEEEEEECCCCHHHHHHHHHHH
FGSFLNGVSTNPSAGTIELEGALGSIVAKPQVSNGGITLQVQQLSGLGFTLPREAVQPAL
HHHHHCCCCCCCCCCEEEECCCCCHHEECCEECCCCEEEEEEECCCCCCCCCHHHHHHHH
DAFTSGLTQNYPMDIKAQSVEVTDTGVTALFSTQNAEIPKSGEDPCFNGL
HHHHHHCCCCCCCCEEECEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]